| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1806 |
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| Symbol | |
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| ID | 9245656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2208817 |
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| End bp | 2211999 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003679740 |
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| Protein GI | 297560766 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.287202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.440265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACTCT GTGTTCTGGG CTCCATCCAT CTGAGCAGCG ACGGACGCCG CGTCACCCCG
ACCACGGGCA AGGAACGCGC GCTCCTCGCC GCCCTGGCAC TGACGGGCCC GGGACGGCTA
CCCCTTCGGG AGCTGGCCGA CCGGCTCTGG AACGGCTCTC CCCCGGAGGG CTACCGCAGC
ACACTGCACA CCTACGTCAC GCGCCTGCGG GGCAAGATCG AGGCGGCCGG GCTGGACCGC
GGCATCCTGA CCCACACCGC CGAGGGCTAC CTGCTGCGCC TCCCCGCCCA GGCGCTGGAC
TGGGAGCGCT TCCGGAGCCT GCGCTCACGC GCCCGCGCCC TGCACCAGGC GGGCCGCTCC
GCCGAGGCGC GCGCGGCCCT GGAGGAGGCG CTGGCGCTGT GGAAGGGGCC CGCGCTGCCC
GGTGTGGGCG GACGCTGGGT CGAACAGCTG CGCGTGTCCA TGGAACGCTC CCACCAGGAC
GCGCTGGCGG TGTGGGCCTC GCTGGCCATC GCCGAGGGCG ACCACGCGGA GGCGGTGGAG
GTCCTGGGTT CGGCCCTGGT CGCCTACCCC GTCAACGAGT CCCTGCACGG CCACCTCCTG
CACGGGCTGC ACGCCCTGGG CCGGACGGCC GACGCCCTCG CGGCCTACCA GCGGTTGCGG
GAGCGGCTGT CGGAGGAGCT GGGCGTGGAC CCCTCCCCGG CGCTGCGGCG GCGGTTCGAA
CTGCTGCTGC GGGCCACCGC CGGTCCGGTC GGGGACGGTG GGTCGGACGG GGACGGCGGG
TCGGACGGGG TCGGCGGGTC GCAGGCCCCG CCTCCCGCGG CCGGGAGGCC GCGCACGATC
GTGGACAACC TGGCGCGCGA GCCCCGGCAC TTCCGGGGGC GCACCGCGCA GACCCGCCTG
CTCTGCTCGC GGCTGCGGGA GACGGAGTCC GGTTTCGCGC ACCTGTGGGT CGTCTGCGGG
ATGGCGGGGG TGGGCAAGAG CCAACTGAGC CTGCACGTGG CCCATCGCGT CAAGGACCTC
TACCCCGACG CGCGGCTGTC GGTGGACCTG CGCGGGCACG ACGAGCGGGC CGCTCCGCTG
AGCGCGGAGG AGGCCCTCAC CGAACTCATG CGCCTGCTGC GCGTGCCGGT GCCGCCCACC
GTGCTGAGCC TGGCCGAACG CGTCGCTCTG TGGCGCGAGC ACACGCGGTC GATGCGCCTG
CTGCTCCTCC TGGAGGACGC CGCCAGCGCC GAACAGGTCC TTCCGCTGCT CCCCAGCGGG
ACCCGGTGCG CGGTCGTGAT CACCAGCCGC TTCTTCCTCC CGGAGGTGGA GGGCGCCGAC
CACCTGCCGC TCGGGCTTCC CTCCGACGAG GAGTGCACCG AGATGTTCAC CGCCGCCCTC
GACCGGCCGT GGGGCGAGGA GGAGGCCGAC ACCCTCGCCG AGATCATCGA CCGGTGCGAC
AGGCTGCCGA TAGCCGTCGG GCTCGTGGCG AACCTGGCCC AGTTCCATCC GTCGTGGTCG
CCGCGCGACC TGCTGCACCG GCTGCCCTCA CCGTCCTTCC CGGGACTGAG CGCCTTCCGG
GTGGGGGGTC GGGACCTCTC ACGCATCTTC GACGTGTCCG TGGACGCCAT GGACCCGAGG
GCCCGTGACG CCTTCCTCCT GCTCGGCCTG CACCCCACCC GCGGTATGGA CGGGCGGGTG
GCGGCGGCGC TGGTCGGCCC CGACGAGCAC GCCTCACGGC AGGCCCTCAT GGACCTGGTG
AGCGCCCACC TCCTGAACGA GCCCGAACCC GATCGCTTCG AGATGCACGC CCTGCTCCAG
GTTCACGCCC GCCACCGCGC GCGCGACGGT CTGTCCCCGG AGCGGGCCCA TGCGGCCAAG
CAGAGGATGC ACGCGGCCTA CCTGTCGTTG ACGAGCCTGG CCGACCGGGC CCTGCACCCG
CACCGGCCCG GGCGCGACGA CCACGAGCCA CTTCCCATCG GGGAGCGATG GCCGGAGGAG
AGGGCCATGG CGTGGTTCCG GCGCGAACTG GCGACCGTGC TCACCATGCT GTCGGAGGCG
GACCGGCACG GCGCGGGCCG CACCGCCCTG CGACTGGCGC GGGTGGTGTG CGACCACATG
GACGCGCACG GTCCCTGGTC CGAGGCGGTC ACCCTGCACA CCGCCATGGT GGAGTGGGCA
CGCGATCAGG GGGAGGACCG TGAGCGGGCC AGGGCCCACT TCGACCTGGC CCGCGCCCTT
CTGCGCGTGG GAGAGGTGGA CCGCGCCGGA GAACACAGCC GTTCGGCCCA TGAGCGGTGG
TCCGAGGCGG GGGACGTCCT GGGACAGGCG TGGGCCGTGG CCCAAGGGGC GATGATCTCC
TACGTCGCCA ACGACTACGC GGGCAGCCGG GCCCTCGTCG AACGGGCTCT GGAGACGTTC
GAGGCGCGCG GACACCGCCC CGGAATAGTG TTCTGCCTGC GTGTGCGCGG GCTGTGCCAC
TTCGCCGTGA GCGCGTCCCA CGAGGCGATC GCGGACTTCA GTGACGCGTC GACCCTGCTG
GAACGCTCAC AGGACCAGCA GTTGCTCATG GAGATGCAAC TGAACCTGGC GGGCGCGTTC
CAACAACTGG GGTACCACCA CCAGTCCTGG TCGCTGTGCG AAAAGGTCCT GGTGACCGCC
CGTCGGCGCG GTGACAGGCG CAGGGCGGCC GTCGCTCTGA CGAATCTGGG CAAGCTGTCC
CTGCACCGGG AGCGGCCGGA GCAGGCCGTA TCGCGTCTTC AGGAATCGTT GAAGATCCTC
GAATCCTTCG GAGACCCCTG GGCCAAGAGC ACGATCCTGA CGAACCTGGG CACAGCACAC
GCCGCAGCCA ACCAGCCGGA CCAGGCCCGC CTCTGCTTCT GTCGCGCTCT GGCAATGCGC
GGGTTCATCA CTCCTCCGGC GCGGACCGAG TCTCTACTGG GCCTGGCCCG ACTGGAGGGG
ACGGCCGGAC GGCACCATGA CGTGGTAACC CACCTGCGCC AGGCCGCCTC GACGGCGCGG
CAGCACGGTC TGCGCAAGGA GCACGCCACA GCCCTGCTCG CTCTGGGCCA ACACCTCAGT
GTCCACGGTG AGCGGAGCGA AGCGAATGCG TGCCTGCGCC AGGCCGCGGA AATCTTCGAG
GTACTTCAGG CTCCCGAGGC TCAGATCACC CGGTCGCTGC TCGAAACTCT GGGCAACACA
TAA
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| Protein sequence | MRLCVLGSIH LSSDGRRVTP TTGKERALLA ALALTGPGRL PLRELADRLW NGSPPEGYRS
TLHTYVTRLR GKIEAAGLDR GILTHTAEGY LLRLPAQALD WERFRSLRSR ARALHQAGRS
AEARAALEEA LALWKGPALP GVGGRWVEQL RVSMERSHQD ALAVWASLAI AEGDHAEAVE
VLGSALVAYP VNESLHGHLL HGLHALGRTA DALAAYQRLR ERLSEELGVD PSPALRRRFE
LLLRATAGPV GDGGSDGDGG SDGVGGSQAP PPAAGRPRTI VDNLAREPRH FRGRTAQTRL
LCSRLRETES GFAHLWVVCG MAGVGKSQLS LHVAHRVKDL YPDARLSVDL RGHDERAAPL
SAEEALTELM RLLRVPVPPT VLSLAERVAL WREHTRSMRL LLLLEDAASA EQVLPLLPSG
TRCAVVITSR FFLPEVEGAD HLPLGLPSDE ECTEMFTAAL DRPWGEEEAD TLAEIIDRCD
RLPIAVGLVA NLAQFHPSWS PRDLLHRLPS PSFPGLSAFR VGGRDLSRIF DVSVDAMDPR
ARDAFLLLGL HPTRGMDGRV AAALVGPDEH ASRQALMDLV SAHLLNEPEP DRFEMHALLQ
VHARHRARDG LSPERAHAAK QRMHAAYLSL TSLADRALHP HRPGRDDHEP LPIGERWPEE
RAMAWFRREL ATVLTMLSEA DRHGAGRTAL RLARVVCDHM DAHGPWSEAV TLHTAMVEWA
RDQGEDRERA RAHFDLARAL LRVGEVDRAG EHSRSAHERW SEAGDVLGQA WAVAQGAMIS
YVANDYAGSR ALVERALETF EARGHRPGIV FCLRVRGLCH FAVSASHEAI ADFSDASTLL
ERSQDQQLLM EMQLNLAGAF QQLGYHHQSW SLCEKVLVTA RRRGDRRRAA VALTNLGKLS
LHRERPEQAV SRLQESLKIL ESFGDPWAKS TILTNLGTAH AAANQPDQAR LCFCRALAMR
GFITPPARTE SLLGLARLEG TAGRHHDVVT HLRQAASTAR QHGLRKEHAT ALLALGQHLS
VHGERSEANA CLRQAAEIFE VLQAPEAQIT RSLLETLGNT
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