Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1805 |
Symbol | |
ID | 9245655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2206100 |
End bp | 2208226 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | putative regulator protein |
Protein accession | YP_003679739 |
Protein GI | 297560765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.569489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTCCC CCGGTCACAC CTCCCCGACC AACGACCCAA GCGCCCGGAC CAACACCGTG CGCGGCGACA TCAGCGGAAC CGCCGTCCAG GTCGGCTCGC TCCGCGGGGA CGTGAACCTG CACCTGGCAT CCGCGGCCGA CCGCGTCCCC CGCCAACTCC CCGCCGCGCC CGCCGTCTTC GTGGACCGGC CCCATCCGAT GCGGGCGCTG GAGGCGGCCG TGTCGCGCGC CCACGCCCGG GGCCGCCACG CACTGGTGGT GATCACGGGC TCGGCGGGGG TGGGCAAGTC CGCGCTGGCG GCGGAGTTCC TGCGCGCGCA CCCGGAACTG GGCGGAGGCG GACAGCTGTT CGTGGACCTG CACGGCTTCT CCCCCGGACA GCCCGCCGAC CCCCACGACG TGCTGGACGT GCTGCTCCGC GCCGTGGGCG TGCAGATCGG GACGGCACCG GCGGACCTCG CCACACGCGC GGCCTGGTGG AGGTCGGCCA CCGCGCACGC GCCCGTGTCG CTGCTGTTGG ACGACGCCCT CTCCGCCGCC CAGGTCCGCG CCCTGCTGCC CGGGGGCGAC CGCGGCACGG TGGTGGTCAC CACGCGTCTG CGGCTGGCCG GGCTGCGCCT GGACGGCGGG CAGTTCGTGG ACCTGCATCC GATGACGGGG GCCGAGGGGG TGGCCCTGCT CTCCGAACTC AGCGGCCGCT CCCCCGCCGG AGAGGCCGAC CGGAAGGCCA TGCACGGCGT CGTCACCCTG TGTTCGGCAC TGCCGGTGGC CGTGTGCACG GTCGCCGTCG ACCACGGCAC CCGCAGCCGG ACCTGGCGGG ACACCGAGCG GCGCCTGCGC TCCGCCCCCC GTCGGCTCGA CCACCTGGAC ACCGCGAGCA GGGAAATGGG TATGGACGTG TCCGTGCGCA ACGCCTTCGA CCTGTCCTAC GCCTCCCTCC CGGTCTTTCC CGCCCTGCTC TACCGGCGTC TGGCCTGGCA CCCGGGCCCC GACGTCACCG GTGAGCTGGC CGCCCACCTC ACCGGCCGCC CGGCGGCCGA GTGCGAGGCG GGGCTGGCCG CCCTCACCCG CCACCACCTG CTGACCGAGC ACAGCGCCGA ACGCTTCTCC TTCCACGACC TGCTGCGCCT GCACGCCGCG GAGAAGGCCG AGGCCGAGGA GGACTCCGGC GCCCGCCACC GGTCGCTGAC GCGGCTGGTG TCCGGGTTCG CCGACCTGGC GGTGTCGGCC GACGCCGTGC TGCGGCCCTA CGCGGGCAAC CGGGCGGTGC CGGGCTCACC CTTCACCGAC GCCGCGCAGG CCACGGCCTG GCTCAACCGG GAGCGCGACA ACCTCGCCGC CCTGGCCGAA CTGGCGCCGC GGCTGGGAGC GCACGAGCAC GTGCCGCGCC TGCTGGACGG CCTGTGGTCG CTGTTCCTGC ACCACGGTCA GGCGCGGTTG TGGCTGCGTG CCGCCGCGCC CGTGCTCGGG GAGTCCTCGG CCGACCTGGA GGAGACGACG GTCGCACGGC TGCTGAACAA CCGCGCGCTG GTGCACAGCC ACCTCGCCGG TGTCGAGGAG GCGATGGCCG ACCTGGACGC CGCCGAACGG GTCTGGCGGC GCCACCAGGA CCTGGAACGC CTGGCCCAGA CCCAGCAGCG CCGGGGCATC GTGGCCTTCC AGAACCACCT CCCCGGGCAG GCCGCCGACC ACCTCGCCCG GGCCGTGGCG ACGGACGAGC GGACCGGGGT CGCCCACAAC CTGGCCATCA GCCTGTTCAT GCTCGGCCGG GCCCGCCACG CCCTCGGGGA CCTCGGCCCG GCCCGCCTGG CCCTGGAGCG CGCCCTCCCC CTCCTGGACG GGGACGCCTA CAACCAGGCC CGGACCAGGA TCGTCCTGGG CACCGTCCTC GCCGCCATGG AGGAGTTCGC GTCCGCATCG GCGGAACTGG ACCGGGCGCT GGAGGTGATG CGCGAGCGCG GCTCGGCCTC CGGCCAGGGC AAGGCCCTGG AGGCGATCGG GGAACTCGCC GAACGCCGCG GGGAGCCGGG CCGGGCCCGC GAGGCCTACG AGCGGGCGGT GGAGCTGCTG CTGCCGACGG ACCCGGCCAG ACTGCGTGTG GAGGAACGCC TGGAGGCGTT GGGATGA
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Protein sequence | MDSPGHTSPT NDPSARTNTV RGDISGTAVQ VGSLRGDVNL HLASAADRVP RQLPAAPAVF VDRPHPMRAL EAAVSRAHAR GRHALVVITG SAGVGKSALA AEFLRAHPEL GGGGQLFVDL HGFSPGQPAD PHDVLDVLLR AVGVQIGTAP ADLATRAAWW RSATAHAPVS LLLDDALSAA QVRALLPGGD RGTVVVTTRL RLAGLRLDGG QFVDLHPMTG AEGVALLSEL SGRSPAGEAD RKAMHGVVTL CSALPVAVCT VAVDHGTRSR TWRDTERRLR SAPRRLDHLD TASREMGMDV SVRNAFDLSY ASLPVFPALL YRRLAWHPGP DVTGELAAHL TGRPAAECEA GLAALTRHHL LTEHSAERFS FHDLLRLHAA EKAEAEEDSG ARHRSLTRLV SGFADLAVSA DAVLRPYAGN RAVPGSPFTD AAQATAWLNR ERDNLAALAE LAPRLGAHEH VPRLLDGLWS LFLHHGQARL WLRAAAPVLG ESSADLEETT VARLLNNRAL VHSHLAGVEE AMADLDAAER VWRRHQDLER LAQTQQRRGI VAFQNHLPGQ AADHLARAVA TDERTGVAHN LAISLFMLGR ARHALGDLGP ARLALERALP LLDGDAYNQA RTRIVLGTVL AAMEEFASAS AELDRALEVM RERGSASGQG KALEAIGELA ERRGEPGRAR EAYERAVELL LPTDPARLRV EERLEALG
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