Gene Ndas_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1784 
Symbol 
ID9245634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2183073 
End bp2183915 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content73% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679718 
Protein GI297560744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.348942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.531836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAGC CGCCGTCACA GCAGCAGACC CCGCCCGGTC GCACCGACGC CATGGACCCC 
AGACCCGACC ACGGCGAGGA GTCCTACCGG GGGTCGGGGC GGCTCGAAGG GAAGGCGGCC
GTCATCACCG GCGCCGACAG CGGCATCGGA CGGGCGGTGG CCATCGCCTT CGCCCGCGAG
GGCGCCGACG TGCTCATCGC TTACCTGGAC GAGCACGACG ACGCGCGGGA GACCGAGCGC
TGGGTGCGCG AGGCGGGCCG CAGGGCCGTC CTGTTCCCCG GCGACCTGGC GGACCCGGCC
CGGTGCCGGG CCCTCGTCGC GAAGGCGGTG GAGGAGTTCG GCCGGGTGGA CGTCCTGGTC
AGCAACGCCG CCTTCCAGAT GACCCACGAG ACGCTGGAGG AGATCCCCGA CGAGGAGTGG
GACCACACCC TGGCCACCAA CCTCAGCGCG TTCTTCCACC TCGCCAAGGC CGCCGTGCCG
CACATGCGGC CCGGCTCCTC GATCATCGCG AGCACGTCGG TCAACTCCGA CTCCCCGCCG
CCCACCCTGC TGCCCTACAA CGCCACCAAG GCGGGCATCG CCAACATGGC CGCCACGCTG
GCCCAGATGC TGGCGCCCAG GGGCATCCGG GCCAACTCCG TGGCGCCGGG GCCGATCTGG
ACCCCGCTGA TCCCCTCGAC CATGCCGCCC GAGCAGGTGG AGGGCTTCGG CTCCCAGGTG
CCGATGGGCC GCGCCGGGCA GCCGTCGGAG CTGGCTCCGG TGTACGTGAT GCTGGCGTCG
GACGAGTCCA GTTACGTCTC CGGCGCCCGC ATCGCGGTCA CCGGCGGCAA ACCGGTCCTG
TGA
 
Protein sequence
MPQPPSQQQT PPGRTDAMDP RPDHGEESYR GSGRLEGKAA VITGADSGIG RAVAIAFARE 
GADVLIAYLD EHDDARETER WVREAGRRAV LFPGDLADPA RCRALVAKAV EEFGRVDVLV
SNAAFQMTHE TLEEIPDEEW DHTLATNLSA FFHLAKAAVP HMRPGSSIIA STSVNSDSPP
PTLLPYNATK AGIANMAATL AQMLAPRGIR ANSVAPGPIW TPLIPSTMPP EQVEGFGSQV
PMGRAGQPSE LAPVYVMLAS DESSYVSGAR IAVTGGKPVL