Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1784 |
Symbol | |
ID | 9245634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2183073 |
End bp | 2183915 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003679718 |
Protein GI | 297560744 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.348942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.531836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCCAGC CGCCGTCACA GCAGCAGACC CCGCCCGGTC GCACCGACGC CATGGACCCC AGACCCGACC ACGGCGAGGA GTCCTACCGG GGGTCGGGGC GGCTCGAAGG GAAGGCGGCC GTCATCACCG GCGCCGACAG CGGCATCGGA CGGGCGGTGG CCATCGCCTT CGCCCGCGAG GGCGCCGACG TGCTCATCGC TTACCTGGAC GAGCACGACG ACGCGCGGGA GACCGAGCGC TGGGTGCGCG AGGCGGGCCG CAGGGCCGTC CTGTTCCCCG GCGACCTGGC GGACCCGGCC CGGTGCCGGG CCCTCGTCGC GAAGGCGGTG GAGGAGTTCG GCCGGGTGGA CGTCCTGGTC AGCAACGCCG CCTTCCAGAT GACCCACGAG ACGCTGGAGG AGATCCCCGA CGAGGAGTGG GACCACACCC TGGCCACCAA CCTCAGCGCG TTCTTCCACC TCGCCAAGGC CGCCGTGCCG CACATGCGGC CCGGCTCCTC GATCATCGCG AGCACGTCGG TCAACTCCGA CTCCCCGCCG CCCACCCTGC TGCCCTACAA CGCCACCAAG GCGGGCATCG CCAACATGGC CGCCACGCTG GCCCAGATGC TGGCGCCCAG GGGCATCCGG GCCAACTCCG TGGCGCCGGG GCCGATCTGG ACCCCGCTGA TCCCCTCGAC CATGCCGCCC GAGCAGGTGG AGGGCTTCGG CTCCCAGGTG CCGATGGGCC GCGCCGGGCA GCCGTCGGAG CTGGCTCCGG TGTACGTGAT GCTGGCGTCG GACGAGTCCA GTTACGTCTC CGGCGCCCGC ATCGCGGTCA CCGGCGGCAA ACCGGTCCTG TGA
|
Protein sequence | MPQPPSQQQT PPGRTDAMDP RPDHGEESYR GSGRLEGKAA VITGADSGIG RAVAIAFARE GADVLIAYLD EHDDARETER WVREAGRRAV LFPGDLADPA RCRALVAKAV EEFGRVDVLV SNAAFQMTHE TLEEIPDEEW DHTLATNLSA FFHLAKAAVP HMRPGSSIIA STSVNSDSPP PTLLPYNATK AGIANMAATL AQMLAPRGIR ANSVAPGPIW TPLIPSTMPP EQVEGFGSQV PMGRAGQPSE LAPVYVMLAS DESSYVSGAR IAVTGGKPVL
|
| |