Gene Ndas_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1769 
Symbol 
ID9245619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2167301 
End bp2167711 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content73% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003679703 
Protein GI297560729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.261309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC AGCGTTTCAC CCCCGAGGGC ATGATGCAGC CCACCCCGTA CCACCACGTC 
GCGGTCGGCA CCGGTACGCG CCACGTGCAC GTCAGCGGAC AGGTCGCCCG CCGCGCCGAC
GCGACCCCGG TGGCCCCGGG CGACCTCGCC GGGCAGGTGG CCCAGGTGCT GCGCAACACC
GCGGCGGGCC TGGCCGGGGC GGGAGCGACG TTCGACGACG TCCTGCGGCT GACCTTCTAC
GTCACGGCGT GGGAGCCCGG CAAGATCGAC GCCTTCATGG CGGGGGTCGC CGAGGTGGCC
GAGGAGATCG GTCTGCCGAC GCCGCTGCCG CCCTCGTCGC TCATCGGCGT GGACTACCTC
TTCGAACCCG ACGTGCTCGT CGAGGTCGAG GCGACGGCCC TCCTCGACTG A
 
Protein sequence
MAVQRFTPEG MMQPTPYHHV AVGTGTRHVH VSGQVARRAD ATPVAPGDLA GQVAQVLRNT 
AAGLAGAGAT FDDVLRLTFY VTAWEPGKID AFMAGVAEVA EEIGLPTPLP PSSLIGVDYL
FEPDVLVEVE ATALLD