Gene Ndas_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1755 
Symbol 
ID9245605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2142314 
End bp2143108 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003679689 
Protein GI297560715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.586856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00328589 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCGCTC CACCGACCGC GGCCGCGACG GAGCGGGGAC TGGGCAACCT CCTGGCCCAG 
GGGGCGGCCA CGGCCGGGCG CAACATCCGC GCCCGGGCCG ACGCGGGCGC CCTGGTGACC 
CTGGGGGTGT TCCCGGCCGT CTTCGTCTTC GGCTTCCTGC TGCTCTTCGG CAGGCTGCTC 
GGCCAGCAGG GCGTCGACTA CGCCCAGTTC CTGCCGCCCG CGATCATCGT GCAGTGGATG 
TTCTCGGTGG CCAACAGCGC GGCGCCGATG CTCGCCGCCG ACCGGCGCGA CGGCCTCATC 
GCCCGTTACC GCTCCATGCC GGTCAACCGG GGCGCCCTGC TGGTCGGACG CTTCCTGGCG 
GACACCGTCT GGGCCCTGGT CTCCGTGGCG GTCATCCTGC TGTGCGGGTT CGTCGCCGGT 
TTCCGGTTCG GGGGCGGAGT GCCCGCCGCG CTCGGCTTCG TCGCGCTCGC GGTGCTGTTC 
GGGCTGGTGC TGACCGCGGG GACCAGCGCC GTCGGGCTGG CCTCACGCGA CCCCGAGTCG 
GTGTCGGCCG TCCTCAACCT CGTCTACCTG CCCCTGCTGA TGCTGTCCAC GGCGTTCGTA 
CCGGCCGAGG CCTTCCCCGG CTGGCTCGAA CCGGTCATCG CCGCCTCGCC GGTCTCGGTG 
GTCATCGACG CGCTGCGCGC GCTCGCCACC GGCGAGGGCG TGGCCGGGGC CGTGGCGCCG 
GCCCTGGTGT GGACGGCCGC GCTGGGCGCC GTCTTCTCGT GGGCGGCCGT CCGCTCCTTC 
CGGAAGGCGG TGTGA
 
Protein sequence
MSAPPTAAAT ERGLGNLLAQ GAATAGRNIR ARADAGALVT LGVFPAVFVF GFLLLFGRLL 
GQQGVDYAQF LPPAIIVQWM FSVANSAAPM LAADRRDGLI ARYRSMPVNR GALLVGRFLA 
DTVWALVSVA VILLCGFVAG FRFGGGVPAA LGFVALAVLF GLVLTAGTSA VGLASRDPES 
VSAVLNLVYL PLLMLSTAFV PAEAFPGWLE PVIAASPVSV VIDALRALAT GEGVAGAVAP 
ALVWTAALGA VFSWAAVRSF RKAV