Gene Ndas_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1754 
Symbol 
ID9245604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2141559 
End bp2142311 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003679688 
Protein GI297560714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00326384 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTCTACG ACAGCGCCCT GCTCGCGGGC CGGGGACTGC GCAGGTTCCT GCGCAGCCCG 
CAACTGCTCG GGGACGCCTT CGGGTTCCCC CTCATCCTGC TCGTCACCCT CCTGGTGATC 
TTCGGCGAGG TCGTCTCGGG TGCCACGGGC GAGTCCTACA TCGCGCGGCT GGCCCCGGCC 
ATCGTGCTGT TCGGCACGGC CTACGCCTGT GTCGGCACCG GGGTCGGGTA CCACTCCGAC 
GTGCGCACCG GGTTCCTCGA CCGGCTGTAC ACCATGCCGC TGTCGCGTCC GGCGCTGCTG 
GCCGGTCGGC TTCTGGGCGA CCTGGCACGG CTGCTGACCG TGGCGGTGGT GACGGTGGCC 
GCGGCGTACC TGTTCGGGTT CCGCTTCACC GCCGGGTTCT GGGCCGCGCT CGCCTTCTTC 
GGCGTGGTCA TGGCCTTCGC CTGGATGTTC CTGTGGCTGG CGCTGGTGGT GGCGCTGCGC 
GCCCGGAGCG AGCAGGCGGT GTCGGGCGCG CTCACCTCGC CCATCACCCT GCTGCTCCTG 
CTGTCGTCGG GGCTGGTCCC GCTGAAGGCG TTCCCGCCGG CAGCCCAGCC GGTCATCCGG 
CTCAACCCGA TGTCGAGCAC CCACGAGGTC CTGATGGGGC TGTCGGCGGG CGGGCCGGTG 
GCCGCCCCCC TGGCGGTCAG CGCCCTGTGG TTCGCCGCGG CCACGGCCCT GCTGGTGCCT 
CTGGCCCTAC GGTCCCTGCG GCGCCGGGCC TGA
 
Protein sequence
MLYDSALLAG RGLRRFLRSP QLLGDAFGFP LILLVTLLVI FGEVVSGATG ESYIARLAPA 
IVLFGTAYAC VGTGVGYHSD VRTGFLDRLY TMPLSRPALL AGRLLGDLAR LLTVAVVTVA 
AAYLFGFRFT AGFWAALAFF GVVMAFAWMF LWLALVVALR ARSEQAVSGA LTSPITLLLL 
LSSGLVPLKA FPPAAQPVIR LNPMSSTHEV LMGLSAGGPV AAPLAVSALW FAAATALLVP 
LALRSLRRRA