Gene Ndas_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1672 
Symbol 
ID9245522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2044137 
End bp2044691 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003679607 
Protein GI297560633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCAGT CGGACGGACG CCGCCTGAAG GGCGAGCAGC GCCGCCAGGC CCTGATCGAG 
GCCACCCTGC GCGTCATCGA ACGCGACGGG GTCGCCGGGG TCAGCCACCG CACGGTCTCC
CAGGAGGCGG GGGTGCCCAC CTCCGCCACC ACCTACTACT TCACCGGCCT GGGAGACCTG
CTGACCGCGG CCCTGACCGG TGTGATGGAC GAGGACTCCG AGCGGATGCG CCGCATGTCC
TCGGGGGGCG ACCGCCGACG CGACCTGGCC GAGCTGCTGT CCAAGGTCGC CTCCGACCCT
GGCCGACTGC TGGCCGAGTA CGAGCTGTTC CTGCTGGCCG CCCGCCAGCC CCACCTGCGT
GAGGCCACGG ACCGCTGGCT GGCCGCGGTC TCGGCCTTCG CGCGGTGCTA CACCGACGAC
CCCGTACGGG TGCGGAACGT GGCGGCGGTC ATCGACGGCA TCCTCCTGCA CACCCTGCTG
AGCGACCACA AACCCGACGC CGACGAGTTC GAGGCCCTGC TGGAGGACGT CCTTCCGCGC
GCGCCCCGGA CCTGA
 
Protein sequence
MKQSDGRRLK GEQRRQALIE ATLRVIERDG VAGVSHRTVS QEAGVPTSAT TYYFTGLGDL 
LTAALTGVMD EDSERMRRMS SGGDRRRDLA ELLSKVASDP GRLLAEYELF LLAARQPHLR
EATDRWLAAV SAFARCYTDD PVRVRNVAAV IDGILLHTLL SDHKPDADEF EALLEDVLPR
APRT