Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1666 |
Symbol | |
ID | 9245516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2036017 |
End bp | 2036925 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003679601 |
Protein GI | 297560627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.883412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACG TGAGCCTGCG GCAGCTGGAG TACCTGAGGG CCATAGCCAG GCTCGGGTCG GTGACGGCGG CGGCGCGGGA GCTGTTCGTC TCGCAGTCGA CGGTCTCGAC GGCGTTGTCC GATCTGGAGG CCGCGCTGGG GGTCACCCTC TTCGTCCGCT CTCCGAAGGG GATGCGCCCC ACCGCGTCGG GGCAGCGCGC CCTGGCCGTG GCCGACGACG TGCGGGCCAG CCTCGAACAG CTCCGGGAGA CCGCCAGCCG GGAGAGGGAG GAGGTCGAGG GGGACCTCAC CATCGGCTGC TACGCGACCA TCGCGCCGAT CCTGCTGCCG AGGGTCATCG CGGAGTTCTC GCGCCGGTAT CCGCAGGTGC GGCTCTCGTT CGTCGAGGCC TCCCACGGAA CCCTCCTGGA CGACCTGCTC AACTCCCGCA TCGACCTGGC GATCACCTAC CACTACGAGC TGGCGAGCGT CCGCCCGGCG GTCGGCGTGG CCTCGCAGTG GCTGCGGTCC GATCCCCCCT ACGCGCTCAC CCCCGTGGAC GGACCCCTGA GCGCGAAGGG GGAGCTGACC CTGGCGGACC TGGCGGTCGA GCCGCTGATC CTCTTCGACC TGCCGCCCGG CGGCGACTAC TTCCTCGGCC TGTTCGACAG GGCGGGGCTG ACGCCCAACG TGCGCTTTCG CACCACGAGC TTCGAGATGG TGCGCGCCCT GGTGGCCCGC GGCCTGGGCA ACGCCCTGCT CACCCAGCGC ACCGTGCTGG AGCGCAGCTA CGAGGACCTG CCCTACGCGA CCAGGGAACT CGACATCCGG TCCGAGGGGC TCGGGATCGA GGTCATGCGG CTCGCGGGGC GCAAGCCGGT GCGGCGGATG GAGGCCTTCG TCGACGTGTG CAGGGAGGTC GTGGTCTGA
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Protein sequence | MGDVSLRQLE YLRAIARLGS VTAAARELFV SQSTVSTALS DLEAALGVTL FVRSPKGMRP TASGQRALAV ADDVRASLEQ LRETASRERE EVEGDLTIGC YATIAPILLP RVIAEFSRRY PQVRLSFVEA SHGTLLDDLL NSRIDLAITY HYELASVRPA VGVASQWLRS DPPYALTPVD GPLSAKGELT LADLAVEPLI LFDLPPGGDY FLGLFDRAGL TPNVRFRTTS FEMVRALVAR GLGNALLTQR TVLERSYEDL PYATRELDIR SEGLGIEVMR LAGRKPVRRM EAFVDVCREV VV
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