Gene Ndas_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1666 
Symbol 
ID9245516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2036017 
End bp2036925 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003679601 
Protein GI297560627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.883412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACG TGAGCCTGCG GCAGCTGGAG TACCTGAGGG CCATAGCCAG GCTCGGGTCG 
GTGACGGCGG CGGCGCGGGA GCTGTTCGTC TCGCAGTCGA CGGTCTCGAC GGCGTTGTCC
GATCTGGAGG CCGCGCTGGG GGTCACCCTC TTCGTCCGCT CTCCGAAGGG GATGCGCCCC
ACCGCGTCGG GGCAGCGCGC CCTGGCCGTG GCCGACGACG TGCGGGCCAG CCTCGAACAG
CTCCGGGAGA CCGCCAGCCG GGAGAGGGAG GAGGTCGAGG GGGACCTCAC CATCGGCTGC
TACGCGACCA TCGCGCCGAT CCTGCTGCCG AGGGTCATCG CGGAGTTCTC GCGCCGGTAT
CCGCAGGTGC GGCTCTCGTT CGTCGAGGCC TCCCACGGAA CCCTCCTGGA CGACCTGCTC
AACTCCCGCA TCGACCTGGC GATCACCTAC CACTACGAGC TGGCGAGCGT CCGCCCGGCG
GTCGGCGTGG CCTCGCAGTG GCTGCGGTCC GATCCCCCCT ACGCGCTCAC CCCCGTGGAC
GGACCCCTGA GCGCGAAGGG GGAGCTGACC CTGGCGGACC TGGCGGTCGA GCCGCTGATC
CTCTTCGACC TGCCGCCCGG CGGCGACTAC TTCCTCGGCC TGTTCGACAG GGCGGGGCTG
ACGCCCAACG TGCGCTTTCG CACCACGAGC TTCGAGATGG TGCGCGCCCT GGTGGCCCGC
GGCCTGGGCA ACGCCCTGCT CACCCAGCGC ACCGTGCTGG AGCGCAGCTA CGAGGACCTG
CCCTACGCGA CCAGGGAACT CGACATCCGG TCCGAGGGGC TCGGGATCGA GGTCATGCGG
CTCGCGGGGC GCAAGCCGGT GCGGCGGATG GAGGCCTTCG TCGACGTGTG CAGGGAGGTC
GTGGTCTGA
 
Protein sequence
MGDVSLRQLE YLRAIARLGS VTAAARELFV SQSTVSTALS DLEAALGVTL FVRSPKGMRP 
TASGQRALAV ADDVRASLEQ LRETASRERE EVEGDLTIGC YATIAPILLP RVIAEFSRRY
PQVRLSFVEA SHGTLLDDLL NSRIDLAITY HYELASVRPA VGVASQWLRS DPPYALTPVD
GPLSAKGELT LADLAVEPLI LFDLPPGGDY FLGLFDRAGL TPNVRFRTTS FEMVRALVAR
GLGNALLTQR TVLERSYEDL PYATRELDIR SEGLGIEVMR LAGRKPVRRM EAFVDVCREV
VV