Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1662 |
Symbol | |
ID | 9245512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2031920 |
End bp | 2032588 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | protein of unknown function DUF1028 |
Protein accession | YP_003679597 |
Protein GI | 297560623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.444376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTCT CCATCGCGGC CCACCAGGAC GGCAGGTTCG GCGTCGCCGC GTCCTCGTCC TCCCCCGCCG TCGCCGCGCG GGTCGTCCAC CTGCGCGACT CCGTCGGCGC GGTCGCCTCG CAGAACATCA CCGACCCGCG GCTGGGAACG GCGCTGCTGG ACCGGCTCGC CGAGGGCGCG AGCCCCCGAG CGGCGCTCGA CGCCGTGACC GCCACCGCAC CGGACATCGC CTACCGGCAG CTCACGGTGG TGGACGCCTC CGGCGCCGCG GCCACGTTCA GCGGCGGCCT CACCCTCGGC GTCCACGGCG AGGCCACCGG CCCCCACTGC GCCGCCGCCG GGAACATGCT CTCGGACCCG GGCGTCCCCG CGGCCATGTG CGAGGCCTTC GCCTCGGCCC GGGGGGAGCT GGAGGAACGC CTGCTCACCG CCCTGGCCGC GGGCCTGGCC GCCGGAGGCG AGGCCGGACC GGTCTACTCC GCGGGGCTGT CCACCGTGTC CGCGCACGGC TGGCGCGACA CGGACCTGCG CGTGGACTGG CGCGAGGACC CGATCGGGGA GTTGGGCGAA CTGCTCAAGG TCTGGCTCCC CCAGCGCGAC GACTACGTCC GGCGCGGCCT GGAACCGGCC GCCTCACCGG GATACGGGGT GCCGGGCGAT GACCGCTGA
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Protein sequence | MTFSIAAHQD GRFGVAASSS SPAVAARVVH LRDSVGAVAS QNITDPRLGT ALLDRLAEGA SPRAALDAVT ATAPDIAYRQ LTVVDASGAA ATFSGGLTLG VHGEATGPHC AAAGNMLSDP GVPAAMCEAF ASARGELEER LLTALAAGLA AGGEAGPVYS AGLSTVSAHG WRDTDLRVDW REDPIGELGE LLKVWLPQRD DYVRRGLEPA ASPGYGVPGD DR
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