Gene Ndas_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1588 
Symbol 
ID9245438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1942656 
End bp1944479 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003679523 
Protein GI297560549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.127314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGGCTGGCC GCTGGAGACC GGCCTGCTGC GCGCGGTGTT CGACAGCGTG 
GGCGCGGGGA TGTTCGTCAT CGACACCACC GGCCGGATCA CCGCCGCCAA CCCCTACGCG
CAGCACATCC TCGGCCGGCC CAGGGAGCGG ATGCTGGGCC TGGACCTGCA CGATCTGCTG
CACCGCGACG CGGAGGGGGA GAGGAGCTCC AGGGAGGACT GCCGCGTCCT GGCCGTGCTC
GCCAGCGGCC ACCCGGCCGA GGGGAGCAGC GAGTCCTTCC TGCGCGGGGA CGGCACGCTC
GTGCCCATCA TCTGGGCGAC CACCCCGCTC CAGCACGAGG GACGCCTGGA GGGCGCGGTC
ATCGTCTTCC ACGACTTCCG GGCGCACCGC GACGCCGCCG AGCAGACCGC GGCGCACCTG
GCGGCCCTGG AGGAGCTCAC CGGCCGGTTG AGCCTGGTCG CGGAGATCTC CGTGGTCCTG
GTCTCCACCC TGGACGTGCC CGAGATGCTG GACAGGCTGG TCCGGCTGCT GGTGCCGGAA
CTGGGGGACT GGGCGGTGGT CGACATGGTC ACCGACGGGC GCACCAAGGA GGTGGAGCGC
GTCGCCGTGC ACGCCCTCGG CGACCAGGAC ACGGCCGAGG CGCTCAAGGG CACGCTGCCG
CCGCTGTCCT CCGACGCCCA CGCGGCGCTG ATGCGCGCCC TGTACAGCAC CCAGCCCGTC
CTGTTCGTCG CCGGTGACCT CGCCCGTGAA CCGGACGAAC CGCTCGCCCG GGCGCACCGG
CGGCTGTTCG ACCGCCTGGG CGGGCACTCC GCGGTGGTGG TGCCGCTGCA CACCCGCAGG
CAGGTCTTCG GGGCGCTGAC CGTGGCCCGC ACCGGGGAGC GGCCCGCCTA CACCGACGCC
GAGATCCTCG TGCTGGGGGA CGTGGCCCGG CGCGCCGGTC TGGTGATGGA GAGCGCCCAG
CTCTTCGCGC AGCAGCGCCA CGTCGCCGAG ACCATGCAGC GCCAGCTCCT GACCCCCCTG
CCGCAGGTCG ACCACCTGCG CTTCGCCGCC CGCTACCAGC CCGCGCAGCA GGCCGCCGAG
ATCGGCGGGG ACTGGTACGA CGCCTTCCTG CTCGCCGACG GCGTCATGAC CATGGTCATC
GGCGACGTGG TCGGCCACGA CCTCCAGGCC GCCGCGCACA TGGCCGAGGT CCGCAACATG
CTGCGCGCCC TGGCGTGGGA CCGCCAGGAA CCGCCCAGCC TGATCATGCG GCGGCTGGAC
GAGGCCATGA CCAACACCAG CGACGCCCCC ATGGCCACCG CCGTCTTCGC CCGTATCGAG
GGCCCCGAGG GCGGGCCCTG GTGTCTGCAC TGGGTCAACG CCGGACACCC CCCGCCGCTG
CTCGTCACCG CCGACGGCCG CACCCGCTAC CTGGAGGACG GCCACGGACC CCTGCTGGGC
ATGAGCGCCG CCCTGCACCT GGGACTGGAC TGGCCCGACG CCCGCGAGGA GATCCCCGCG
GAGTCCACCC TGCTGCTGTA CACCGACGGC CTCGTCGAGA GCCGCGACCA CCCCATCGAC
ACGGGCCTGG CCAACCTGCG CCGCCACGCC GCCGCCCTGG CCCGCCGCGA CGTCGAGGAC
TTCTGCGACG AACTCCTCGC CCGCATCTCC CCCCGCGGTG ACGACGTCGC CCTGCTCGCC
CTGCGCATCC CGGCGGCGGG AGAGGGGGCG GGCGAGGACA CCGCGCCGCC CCAGCACGCG
CACAGCCCCG CCGCGCCCGA CCGCGGGGCG CCCGGCGCGG CAGTCGAGGA CAGCCCGGTC
AGGGACACCT CCGAGCGGGG GTGA
 
Protein sequence
MSDDGWPLET GLLRAVFDSV GAGMFVIDTT GRITAANPYA QHILGRPRER MLGLDLHDLL 
HRDAEGERSS REDCRVLAVL ASGHPAEGSS ESFLRGDGTL VPIIWATTPL QHEGRLEGAV
IVFHDFRAHR DAAEQTAAHL AALEELTGRL SLVAEISVVL VSTLDVPEML DRLVRLLVPE
LGDWAVVDMV TDGRTKEVER VAVHALGDQD TAEALKGTLP PLSSDAHAAL MRALYSTQPV
LFVAGDLARE PDEPLARAHR RLFDRLGGHS AVVVPLHTRR QVFGALTVAR TGERPAYTDA
EILVLGDVAR RAGLVMESAQ LFAQQRHVAE TMQRQLLTPL PQVDHLRFAA RYQPAQQAAE
IGGDWYDAFL LADGVMTMVI GDVVGHDLQA AAHMAEVRNM LRALAWDRQE PPSLIMRRLD
EAMTNTSDAP MATAVFARIE GPEGGPWCLH WVNAGHPPPL LVTADGRTRY LEDGHGPLLG
MSAALHLGLD WPDAREEIPA ESTLLLYTDG LVESRDHPID TGLANLRRHA AALARRDVED
FCDELLARIS PRGDDVALLA LRIPAAGEGA GEDTAPPQHA HSPAAPDRGA PGAAVEDSPV
RDTSERG