Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1559 |
Symbol | |
ID | 9245409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1909251 |
End bp | 1909916 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679494 |
Protein GI | 297560520 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.286529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.011068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCC GAACGCCCCC TACCGCGCCC GGCGGCGACG CCCCGGGGCT GCGCGCCGAC GCGCTGCACA ACCGCCACCG CATCGTCGAG GCGGCCCGCG CGGCCTTCGC CGAACGCGGG ATCGACGTGC CGATGTCGGC CATCGCCCGC CGCGCCGGAG TGGGGGTCGC CACCCTCTAC CGCCGCTTCC CCACCCGCGA GGCCCTGGTC ACCGAGGTGT TCGCCGACCA GCTGACGGCC TGCGCCTCCC TGGTGGACGA CGGCCTCGCC GACCCGGACC CCTGGCGGGG CTTCTGCTCG GTGGTCGAGC GGGTGTGCGC GATGCAGGCC GCCGACCGGG GCTTCACCGG CGCGTTCCTC ACCACCTTCC CCGGCGCGGT CCCCTTCGAG GAGAAGCGCG AGCGCGCCGA ACGCGGCCTC ACCGAACTCA TCCGCCGGGC CAAGGCGGCC GGGCGGCTGC GCCCCGACTT CGCGCTCGCC GACCTCACGC TGGTGTTCCT GGCCAACTGC GGGGCCGCCT CCGGCCCGCC GGAGGCGGCC GCCGCCTCCT CCCGCCGCCT GGTGGCCTAC CTCCTCCAGT CCTTCGAGAA CACGGAACGG CGCCGCCCCC TGCCAGCCGC CCCCGAGATC GGGCTGGACC AGATCCCCGA CCTCTCCACG GGCTGA
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Protein sequence | MPARTPPTAP GGDAPGLRAD ALHNRHRIVE AARAAFAERG IDVPMSAIAR RAGVGVATLY RRFPTREALV TEVFADQLTA CASLVDDGLA DPDPWRGFCS VVERVCAMQA ADRGFTGAFL TTFPGAVPFE EKRERAERGL TELIRRAKAA GRLRPDFALA DLTLVFLANC GAASGPPEAA AASSRRLVAY LLQSFENTER RRPLPAAPEI GLDQIPDLST G
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