Gene Ndas_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1525 
Symbol 
ID9245375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1870038 
End bp1870910 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003679460 
Protein GI297560486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00118323 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCACCGCCCC CTCGTCCGCC CCGCGCCCGC TGGCCCACGG GAGCCTGCCG 
CCCCGCCGGC CCACCCGGGC CCAGCGCCTG CGCAAGGCGG GGGCCGACAC CCTGGTGCTG 
ACCCGCCGCA ACTTCCGGCA CATGGTCCGC GACCCCTTCG AACCGGCCAT CGCGATCACC 
ATGCCGGTGG TGGTGGTGCT CCTGTTCGGC TACGTGTTCG GTGACGTGAT GGCGCCCCCG 
GGCACGGAGA ACTACCGCGA ATTCCTGGTC CCGGCGATGC TGGCGATGGT CATGCTCTAC 
GGCATCGGCG GCACCGCCTC CGGGATCGCC CGCGACACCG CCCGCGACGT GATGAGCCGC 
TTCCGGTCCA TGCCCATGTC CCCCGCGGCC CTGCTCGGCG CCCGCGCCCT GGCGGACATG 
GCGCGCGCCT GCCTGGAGGT GGCCCTGCTG CTCCTGGTCG GGTTCGCGAT GGGCTGGCGC 
GCCGGGGAGG GGCTCTCCGG AGCCCTGGCC GCCGTCGGCG TGCTGCTGCT CTTCAGGCTG 
GCCTTGGTGT GGCTCGGGGT GCTGCTGGGT CTGGTGCTGC CCACGGCCGA CTCCGTGAGC 
ATGATCGTCT ACCCGCTGAC GTTCCCGCTC AGCATGCTCT CGACGAGCTT CGTCCCGTCC 
GAGGCCATGC CCTCCTGGCT GGCCCCGGTC GCCGAGTGGA ACCCGCTGTC GGCGGTGGTC 
ACCGCCGCCC GTGACCTGTT CGGCAACCCG TCCCTGCCCT CGGACGCCTG GCCCGCGGAG 
AACGCCCTGC TCGTGGCCGT GGCCCTGCCG GTGGCCGTCA TGCTCCTGGT CACCCCGCTG 
GCCGTGCGCC GCTTCCGGCG GCTCAGCCGC TGA
 
Protein sequence
MTAATAPSSA PRPLAHGSLP PRRPTRAQRL RKAGADTLVL TRRNFRHMVR DPFEPAIAIT 
MPVVVVLLFG YVFGDVMAPP GTENYREFLV PAMLAMVMLY GIGGTASGIA RDTARDVMSR 
FRSMPMSPAA LLGARALADM ARACLEVALL LLVGFAMGWR AGEGLSGALA AVGVLLLFRL 
ALVWLGVLLG LVLPTADSVS MIVYPLTFPL SMLSTSFVPS EAMPSWLAPV AEWNPLSAVV 
TAARDLFGNP SLPSDAWPAE NALLVAVALP VAVMLLVTPL AVRRFRRLSR