Gene Ndas_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1524 
Symbol 
ID9245374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1869233 
End bp1869952 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679459 
Protein GI297560485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00235221 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGCCGCCCC TCCGGAGCGG ACCGCCCAGC GCCCCGGCCC CCGCTGGTGG 
CAGCGCCCCT GGATCCTGCC CCTGGCCCTG TTCAGCGCGA CCTTCCTGGT CTACGCCCTA 
CCGCCCTACC TCGGCCTGGA CCCCGCCCAG GCGCGCGTGG GCCTCCCCGG GGACGTCGCC 
TGGTACTACC CGGTACTGGT CACCCACGTC TTCGGCGGCT CCCTGCTGAC GATGCTGGTG 
ATCCTCCAGG TGTGGCCGTG GCTGCGCGCC CGCCACCCGG CCGTGCACCG CTGGAGCGGC 
CGCGTCTACG TCCTGGCCGG AATCCCGCTC GTGGGCGTCC CCGGGCTGCT CATCGCCCCG 
CTCAGCCACT TCGGCACCAG CGTCCAGATC AGCAACGTCA TCTGGGCCCT CCTGTGGCTG 
TCCTTCACCG TCATCGGCTA CCGGATGGCG CGTCGGCGCC GCTTCGCCCA GCACCGCGAG 
TGGATGCTGC GCAGCTTCGC CCTCATCTAC GGCATCGCGT TCAGCCGGGT GCTCACCGTC 
GTGCTGGTCA TGGCGCATCT GCCCCGGCTG GAGAGCGATT ACGGCGGCGA CGCCGATGCG 
CTGGGGCTGG CCATCGCCCC GGCCAACGCC TTCCTGTCCT GGATCGTGCC GCTGCTGCTG 
GTGGAGTGGT GGCTCAAGTA CCGCCGCCCG CGCGGGCGGC GCCCGCGCGC CGCGGCCTGA
 
Protein sequence
MTATAAPPER TAQRPGPRWW QRPWILPLAL FSATFLVYAL PPYLGLDPAQ ARVGLPGDVA 
WYYPVLVTHV FGGSLLTMLV ILQVWPWLRA RHPAVHRWSG RVYVLAGIPL VGVPGLLIAP 
LSHFGTSVQI SNVIWALLWL SFTVIGYRMA RRRRFAQHRE WMLRSFALIY GIAFSRVLTV 
VLVMAHLPRL ESDYGGDADA LGLAIAPANA FLSWIVPLLL VEWWLKYRRP RGRRPRAAA