| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1521 |
|---|
| Symbol | |
|---|
| ID | 9245371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 1865081 |
|---|
| End bp | 1866382 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003679456 |
|---|
| Protein GI | 297560482 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.542357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACAC ACACCGCTCA GCCAGGGGAC GCCCTCACCG AGTCCGAACG GGCCCGGCTC
CAGCGGCGCA CCGTCCTGGT CCTCATGCTC GCCCAGGTGG TCGGGGGCGT GGGCATGGGC
GCGATGATCG CGGTGGGCGC GCTCATCGCC CTCGAACTCA CCGGCTCCGA CACCTGGTCC
GGCATGGCCA CCACCATGAT CACCCTGGGC GCCGCGGTGT TCGCCCTGCC CCTGGCCTCG
CTGGCAGCCC GGCGCGGCCG CCGACCCGGC CTCGCGCTGG GCTGGATGCT CGGCGCGCTC
GGCGGCACCG TCGTCATCGC CGCCACGGTG CTGGAGGCGT TCGCGCTCTT CCTCGTCGGC
ATGGTTCTGG TCGGCGCCGG GACCGCCACC AACCTCCAGG CGCGCCACGC CGCCGCCGAC
CTGGCCTCCG AGCGCAGCCG CGGCCGGGAC CTGTCGATCG TGGTCTGGGC GACCACCGTC
GGTTCGGTGG CGGGCCCCAA CCTCACCGGC CCCGGCGCGC GCGTGGCCGA CCTGTTCGGC
CTGCCCGCCC TGCTGGGCCC GGTGCTGTTC ACCACCACCG GGTTCGTCCT GGGCGGACTG
CTGATCCTCG CCCTGCTGCG CCCGGACCCG CTCCGCGCGG CCACCGCGGA CCGCCCCTCC
GGCGGCGCGG CCCCCTCCGG AGCCCGGCTG TCCGTGGCCG GGGCGCTGCG GGTGGTCGCG
GCCGGCCCGG GGGCGCTGCT CGCGGTGGTC GGCATCGTGG CCAGCCACAC CGTGATGGTC
GCGGTCATGA CCATGACGCC GGTGCACATG TCGCACCACG GAGCGGCGCT GACCGTGATC
GGCCTGACCA TCTCCCTGCA CATCGCCGGC ATGTACGCCC TGTCGCCGGT GGTGGGGTGG
CTCACCGACC GGTTCGGGCG GGTGCCCGTC CTGCTGGCCG GTCAGGGGAT CCTGATCGCC
GCCGCGGTGG TGGCGGGCAC GGCCGGGCAC GATGAGGCCA GGGTGACGGT CGGTCTGGTG
CTGCTGGGGC TGGGGTGGTC GTTCGGGCTG GTGTCCGGGA CGGCGCTGCT GGCGGAGTCC
CTGGCGGCGG ACGTGCGCCC CCGCGTGCAG GGTGTGAGCG ACCTGGTGAT GAACCTGGGC
GGCGCGGCGG CGGGCGCCCT GTCGGGTGTG GTGCTGGCTC AGGCGGGCTT CGGCGGCCTC
AACCTGTTCG CGGCCGTGTT CACCGTGCCG GTGTTCGTGC TCGCCGTGCG CGCCCGGCTG
GCCCGGGCGG ACCGGCGGGA GCGGACCGGG GAAGCGCGCT GA
|
|---|
| Protein sequence | MSTHTAQPGD ALTESERARL QRRTVLVLML AQVVGGVGMG AMIAVGALIA LELTGSDTWS
GMATTMITLG AAVFALPLAS LAARRGRRPG LALGWMLGAL GGTVVIAATV LEAFALFLVG
MVLVGAGTAT NLQARHAAAD LASERSRGRD LSIVVWATTV GSVAGPNLTG PGARVADLFG
LPALLGPVLF TTTGFVLGGL LILALLRPDP LRAATADRPS GGAAPSGARL SVAGALRVVA
AGPGALLAVV GIVASHTVMV AVMTMTPVHM SHHGAALTVI GLTISLHIAG MYALSPVVGW
LTDRFGRVPV LLAGQGILIA AAVVAGTAGH DEARVTVGLV LLGLGWSFGL VSGTALLAES
LAADVRPRVQ GVSDLVMNLG GAAAGALSGV VLAQAGFGGL NLFAAVFTVP VFVLAVRARL
ARADRRERTG EAR
|
|---|
| |