Gene Ndas_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1513 
Symbol 
ID9245363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1854728 
End bp1857226 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content75% 
IMG OID 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003679449 
Protein GI297560475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.919123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.325958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGG GACGGCTGCG GGTCTTCCTC GGGGCGGCCC CGGGAGTGGG CAAGACCCAC 
ACCATGCTGG AGGAGGGCAG GCGCCTGCGC GACGAGGGCC GCGACGTGGT GGTCGCCATC
GTGGAGACCC ACGGCCGCGA GGCCGTCGCC GCCCTGCTCG ACGGGATGGA GACCGTCCCC
CGCACGGCGG TCTCCCACCG GGGCGTGGGC CTGACGGAGA TGGACCTGGA CGCCGTCCTG
GCCAGGCGGC CGCAGGTCGC CCTGGTCGAC GAGTTCGCCC ACACCAACGC CCCCGGCGCG
CGCCACGGCA AGCGCTGGGA GGACGTGGCG CGGCTGTGCG CCGCGGGCGT GGACGTCATC
ACCACCGTCA ACATCCAGCA CATCGAGTCC CTCAACGACG TGGTCCAGCG CATCACCGGG
GCGCCCCAGC GCGAGACCGT CCCGGACCGG GTGCTGCGCG CGGCCGACCA GATCGAGCTG
GTCGACCTCG CGCCCCAGGC CCTGCGCGAC CGGCTCGCGG CGGGCCGGGT CTACCCTGCC
GAGCGCATCG ACGCCGCCCT GTCGAACTAC TTCCGCCTGG GCAACCTCAC CGCGCTGCGC
GAACTGGCCC TGCTCTGGCT GGCCGACGAG GTCGACAGCG CGCTGATGGA CTACCGGGCC
GAACACCGCA TCGACAGCAC CTGGGAGGCG CGCGAGCGCG TCGTGGTCGC CCTCACCGGC
GGCCCCGAGG GGGAGACGCT GCTGCGCCGG GGCGCGCGCA TCGCCGCCCG CTCGGGCAGC
GGCGAACTCC TGGCCCTGCA CGTCAGCGGC CAGGAGGGCC TGCGCGACGC CCGTCCCGAG
GCTCTCGCCG CCCAGCGCGT CCTGACCGAG CGGCTGGGGG GCACCTTCCA CCAGGTGGTC
GGCGACGACA TCCCCCGCTC GCTGGTGGAG TTCGCCCGCG CGGTCAACGC CACGCAGCTG
GTCATCGGCA TCAGCCGCCG CGGCCGCCTC CTCACCGCGC TCACCGGACC CGGGGTCGGC
GCGACCGTCA TCCGCGAGTC GGGCCCCATC GACGTGCACA TGGTCAACCA CGCCGCGGCC
GCCAGGGGTC CGGCCCTGCC GCGCCTGGGC GGGGCGCTCA GCCTGCGGCG CCGCCTGGCG
GGGTTCGCGC TCTCGCTCGT GGCGGGACCG CTCCTGACCT GGATGCTGGC GGCCGAGCGC
AGCCCGGAGG CGCTGGTCGC GGACGTGCTG ACCTACCAGC TGCTGGTGGT GGTCGTGGCG
CTGGTCGGCG GCATCTGGCC CGCGCTCTAC ACCGCCGTGA TGTCGGCCGT GACGCTGGAC
CTGCTGTTCA TCGAACCGGT GCTGCAGATC AGGATCGACC ACCCCGTCCA CCTGGGCGCC
CTGGTCCTGT ACGCCCTCAA CGCGGTCCTG GTCAGCTACG TCGTCGACCA GGCCGCGCGC
CGCACCCGCG CCGCCCAGCG GGCCGGGGCC GAGTTCGAGC TGCTCGCCAC CGTCGCGGGC
AGCGTCCTGC GCGGCCAGGA CGCCCTCAGG GCCCTGGTCG GCCGCACCCG CGAGGCCTTC
GCCCTGGACG CGGTGCGGCT GCGCTCGGAC GGTGCGGTCC TCAGCTCCGC GGGCGAGGCC
CCGCCCGGTG CCGAACCCAC GGTCGTGGCC GTGGGCGAGC GCGCCAGCCT CGAACTCCAC
GGCGCCGAGC TCGGCGCCTC CGAACGGCGG CTCCTGGAGG TGATCGCCAC CCAGATCGAC
GCGGCCCTCG AACACCAGGA CCTGCGCGCC ACCGCCAGCG AGGTGGGCCC GCTCGCCGAG
AACGACCAGG TCAGGAGTGC CCTGCTCTCC GCGGTCAGCC ACGACCTGCG CCGTCCGCTG
GCCGCCGTGA CCACCGCGGT CAGCAGCCTG CGCCTGTCCG GGGTGGACTG GTCGCCCGGC
GACCGCGACG AACTGCTCGC CACGGCCGAG GAGAGCCTGG CCACGCTCAC CGCCCTGGTC
ACCGACCTGC TGGACGTCAG CAGACTCCAG GCGGGCGTGC TGGCGGTCTC CGCCCACGAC
ACCGACGTGG ACGAGGTGAT CCTGCCCGCG CTGGACGAGC TGGGCCTGGG CCCCGCCGAC
GTGGACCTGG AACTGGACCC CGACCTGCCC GCCGTGCGCG CCGACGCCGG GCTGCTCCAG
CGGGCCATCG TCAACCTCCT GGCCAACGCC GTGCGCTTCT CCCCGCCGGG GCGCGGGGCC
CGCGTGGCCA CCAGCGCCTT CGGCGCCGCC GCCCAGATCC GGGTGATCGA CCACGGCCCG
GGCGTCTCCC CGGACCGCCT CGACCAGCTC TTCGTCCCCT TCCAGCGGCT GGGCGACACC
GACAACACCA CGGGCCTGGG CCTGGGGCTG GCGCTGTCCC GGGGGTTCGT GGAGGGGATG
GGCGGGCGGC TCACCGCCGA GGACACCCCC GGCGGCGGGC TGACCATGGT CATCTCCCTG
CCCCTGGCCG AGCGCCCCGG CCCTGGGGAG GACGCGTGA
 
Protein sequence
MRRGRLRVFL GAAPGVGKTH TMLEEGRRLR DEGRDVVVAI VETHGREAVA ALLDGMETVP 
RTAVSHRGVG LTEMDLDAVL ARRPQVALVD EFAHTNAPGA RHGKRWEDVA RLCAAGVDVI
TTVNIQHIES LNDVVQRITG APQRETVPDR VLRAADQIEL VDLAPQALRD RLAAGRVYPA
ERIDAALSNY FRLGNLTALR ELALLWLADE VDSALMDYRA EHRIDSTWEA RERVVVALTG
GPEGETLLRR GARIAARSGS GELLALHVSG QEGLRDARPE ALAAQRVLTE RLGGTFHQVV
GDDIPRSLVE FARAVNATQL VIGISRRGRL LTALTGPGVG ATVIRESGPI DVHMVNHAAA
ARGPALPRLG GALSLRRRLA GFALSLVAGP LLTWMLAAER SPEALVADVL TYQLLVVVVA
LVGGIWPALY TAVMSAVTLD LLFIEPVLQI RIDHPVHLGA LVLYALNAVL VSYVVDQAAR
RTRAAQRAGA EFELLATVAG SVLRGQDALR ALVGRTREAF ALDAVRLRSD GAVLSSAGEA
PPGAEPTVVA VGERASLELH GAELGASERR LLEVIATQID AALEHQDLRA TASEVGPLAE
NDQVRSALLS AVSHDLRRPL AAVTTAVSSL RLSGVDWSPG DRDELLATAE ESLATLTALV
TDLLDVSRLQ AGVLAVSAHD TDVDEVILPA LDELGLGPAD VDLELDPDLP AVRADAGLLQ
RAIVNLLANA VRFSPPGRGA RVATSAFGAA AQIRVIDHGP GVSPDRLDQL FVPFQRLGDT
DNTTGLGLGL ALSRGFVEGM GGRLTAEDTP GGGLTMVISL PLAERPGPGE DA