Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1431 |
Symbol | |
ID | 9245281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1752771 |
End bp | 1754000 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003679369 |
Protein GI | 297560395 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGG CCACCGCGCC CGGCTTCAGC CTGGAACTGA GCGAGGACGT CCGCGAGGTC CGGGACTGGA CCCACGGGTT CGCCGCCGAC GTCATCCGCC CCGCCGCCGC CGAGTGGGAC GAACGGGAGG AGACCCCCTG GCCGATCATC CAGGAGGCCG CCAAGATCGG CCTGTACTCC CTCGACTTCT TCGCCAACCA GTGGCTGGAG CCCAGCGGCG TCGGCATCCC CGTGGCCTTC GAGGAGCTGT ACTGGGGTGA TCCGGGCATC GCCCTGGCCA TCACCGGCAC CGGCCTGGCC GCGGTGTCCG TCGCCGCCAA CGGCACCCAG GAGCAGCTCT TCGAGTGGAC GCCGCAGATG TTCGGCACCC CAGACGACAT CCGGCTCGCC GCGTTCTGCT CCTCCGAGCC CGACGCGGGC AGCGACGTCT CGGCCATCCG GACCCGCGCC GTCCACGACC AGGCCAAGGA CGAGTGGGTG CTCAACGGCA CCAAGACCTG GGCGACCAAC GGCGGTATCG CCGACATCCA CGTCGTGGTC GCCTCGGTGG AGCCCGAACT CGGCTCGCGC GGACAGGCCA CGTTCATCGT GCCACCCAAC ACGCCCGGGC TCAGCCAGGG GCAGAAGTTC GCCAAGCACG GCATCCGCGC CTCGCACACC GCCGAGGTGG TCCTGGACGA CGTACGCGTG CCCGGCTCGT GCCTGCTGGG CGGCAAGGAA AAGCTCGACG AGCGCCTGGC CCGCGCCCGC GAGGGCAGGG GCTCCAAGGG CCAGGCCGCC ATGAAGACCT TCGAGGCCTC CCGCCCGACG GTCGGCGCGA TGGCGGTGGG CTGCGCCCGC GCCGCCTACG AGTACGCCCG CGACTACTCC ACCCAGCGCG AGCAGTTCGG CCGTCCGATC GGCGAGAACC AGGGCGTGGC CTTCACCCTG GCCGAGATGG CCACCCGCAT CGACGCGGCC CGCCTGCTGG TGTGGCGCGC GGCGTGGATG GCGCGCAACG ACAAGGACTT CGACAGCGCG CAGGGATCGA TGAGCAAGCT CTACGCGAGT GAGACCGCCA CGTTCGTCAC CCAGAACGCC GTGCGCATCC TCGGTGGCAA TGGGTACACG CGTGATTACC CTGTGGAGCG TTGGCACCGC GACTCCACGA TCTTCACGAT TTTCGAAGGG GCCAGCGAGA TCCAGAAGCT CATCATCGGC CGCGCCGTCA CCGGCCTGCC GGTGCGCTGA
|
Protein sequence | MSEATAPGFS LELSEDVREV RDWTHGFAAD VIRPAAAEWD EREETPWPII QEAAKIGLYS LDFFANQWLE PSGVGIPVAF EELYWGDPGI ALAITGTGLA AVSVAANGTQ EQLFEWTPQM FGTPDDIRLA AFCSSEPDAG SDVSAIRTRA VHDQAKDEWV LNGTKTWATN GGIADIHVVV ASVEPELGSR GQATFIVPPN TPGLSQGQKF AKHGIRASHT AEVVLDDVRV PGSCLLGGKE KLDERLARAR EGRGSKGQAA MKTFEASRPT VGAMAVGCAR AAYEYARDYS TQREQFGRPI GENQGVAFTL AEMATRIDAA RLLVWRAAWM ARNDKDFDSA QGSMSKLYAS ETATFVTQNA VRILGGNGYT RDYPVERWHR DSTIFTIFEG ASEIQKLIIG RAVTGLPVR
|
| |