Gene Ndas_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1429 
Symbol 
ID9245279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1749655 
End bp1750953 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content70% 
IMG OID 
Productisocitrate lyase 
Protein accessionYP_003679367 
Protein GI297560393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.307912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCA GCGCTCGACG ACAGGAAGCC AGCGCCGCAC TCCAGCGCGA CTGGGAGACC 
AACCCCCGGT GGGCCGGTAT CGAGCGCACC TACTCCGCCG ACGACGTGGT CAAGCTCCGC 
GGTTCGGTCA CCGAGGAGCA CACCCTGGCC CGCCGCGGCG CGGAGCGCCT GTGGGACCTG 
CTCCGCACCG AGGACTACGT CAACACCCTC GGCGCCCTCA CCGGCAACCA GGCGGTCCAG 
CAGGTCCGTG CCGGGCTGAA GGCCATCTAC CTCTCCGGCT GGCAGGTCGC GGCCGACGCC 
AACCTCTCGG GCAACACCTA CCCCGACCAG AGCCTGTACC CGGCCAACTC GGTCCCGGCC 
GTGGTCCGCC GCATCAACAA CGCGCTGATG CGCGCCGACC AGATCACCTG GGCCGAGGGC 
GACGACAGCG CGCCCGAGTG GCTCGCCCCG ATCGTGGCCG ACGCCGAGGC CGGGTTCGGC 
GGCGTCCTCA ACGCCTACGA GCTGATGCGG GGCATGATCG CCTCCGGCGC GGCGGGCGTG 
CACTGGGAGG ACCAGCTGGC CTCCGAGAAG AAGTGCGGCC ACCTGGGCGG CAAGGTCCTC 
ATCCCCACCG GGCAGCACGT CAAGACGCTC AACGCCGCCC GCCTGGCCGC GGACGTCGCC 
GGTGTCCCGT CCCTGGTCAT CGCGCGGACC GACGCCCAGG CCGCGACCCT GATCACCAGC 
GACGTCGACG AGCGCGACCA GCCCTTCATC ACGGGCGAGC GCACCGCCGA GGGCTTCTAC 
CGCTTCCGCA ACGGCGTCGA GGCCTGCGTG GCGCGCGGCC TGGCCTACGC CCCGCACTCG 
GACCTGCTGT GGATGGAGAC CGCCACCCCC GACCTGGAGG TGGCCCGCGA CTTCGCCGAG 
CGGATCAAGG CCGAGTACCC GGACCAGATG CTGGCCTACA ACTGCTCGCC GTCCTTCAAC 
TGGAAGCGCC ACCTGGACGA CGCGACCATC GCCAAGTTCC AGCGCGAGCT GGGCCACATG 
GGCTACAAGT TCCAGTTCAT CACCCTGGCG GGCTTCCACT CGCTCAACTA CTCGATGTTC 
AACCTGGCCA AGGGCTACGC CCAGAACGGG ATGACCTCGT ACGTCGAGCT CCAGGAGGCC 
GAGTTCGCGG CCGAGTCGCA GGGCTACACC GCCACCCGCC ACCAGCGCGA GGTCGGCACC 
GGCTACTTCG ACTCCATCAG CACGACCATC TCCCCCGAGG CCAGCACCAC GGCTCTCACC 
GGCTCCACCG AGGAAGACCA GTTCTCAGCG GCTCACTGA
 
Protein sequence
MGTSARRQEA SAALQRDWET NPRWAGIERT YSADDVVKLR GSVTEEHTLA RRGAERLWDL 
LRTEDYVNTL GALTGNQAVQ QVRAGLKAIY LSGWQVAADA NLSGNTYPDQ SLYPANSVPA 
VVRRINNALM RADQITWAEG DDSAPEWLAP IVADAEAGFG GVLNAYELMR GMIASGAAGV 
HWEDQLASEK KCGHLGGKVL IPTGQHVKTL NAARLAADVA GVPSLVIART DAQAATLITS 
DVDERDQPFI TGERTAEGFY RFRNGVEACV ARGLAYAPHS DLLWMETATP DLEVARDFAE 
RIKAEYPDQM LAYNCSPSFN WKRHLDDATI AKFQRELGHM GYKFQFITLA GFHSLNYSMF 
NLAKGYAQNG MTSYVELQEA EFAAESQGYT ATRHQREVGT GYFDSISTTI SPEASTTALT 
GSTEEDQFSA AH