Gene Ndas_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1400 
Symbol 
ID9245250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1714727 
End bp1715653 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679338 
Protein GI297560364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.527187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00390596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACACGA GGTGGGCAAA GGGTGCGAAA ATCGACACCG TCATGAAGCA GCCGTCCTAC 
ATCCTCGTGG TCAACGGGAC CAAGGTCGAG CGCCCGGTGT TCGTCCTGGG CGCTCCCCAC
TCGGGAGTCG CCGAGGTCGC CCGTGCCCTG TCGCGCGTGC CCGGCCTGCA CCTGGGCGCG
GGCTCGTCGG GCGTGCTCAA CGCCGTCTAC GCCGTGGCCA GACGCCCCTC CCTCGCGTTG
GAGAAGGTCG CCGGGACGGC GAGCCTGCTG CGCGAGGCCT ACGCCGAGGC CTGGCAGCTC
ACGCCCCTGA CCTGCCCGCG CTGTCCGGGG CCGTGGGCGC GCGTGCCCGC CAACGCCGCC
GCCGAGCCGT GCGAGCACAG CGCGGAGGTG CGCCGCTACG GCGACGCCAG CCCCGACCTG
CTGTTCTGCG CCACCGCCCT GCACGCGGCC TTCCCCGACG CCCTGTTCGT CCAGGTCATC
CGGGACGGCC GCGACGTCAT CGCGGACATG ATGGAGGACG AGCGCTCGCT GGCCTGGCTC
AAGCCGAGCT TCATGAAGCT CGACCACGAG TTCCCCAACC ACTTCTTCGG CCTGGAGGAG
GAGTCGGACC TGTCCGCGTT CACGGAGGGC TCCACCGCCG CCAAGTGCGC GATGCGCTGG
CGCGGGGCGA TCCGCATGTC GGCCCTGCTG CGCCGCTCCA TCGGCGCCGA GCAGCTGATG
ACCCTGCGTT ACGAGGACGT GCACGGCGGC GAGGTGGAGG CGGCCGAGCG GCTGCGGGAG
TTCACCGGGG CGCGGGTGTC GGCCTCGGAG CTGCTGACCG CGGAGTCCTG GGGCGTGGGG
TCGTGGCGCG AGCGCCTGAC GCGCGACCAG TACGGCGACG TGCGCCAGGT GGCGGGCACG
GAGCTGTCCC GGCTCGGCTA CACCTGA
 
Protein sequence
MHTRWAKGAK IDTVMKQPSY ILVVNGTKVE RPVFVLGAPH SGVAEVARAL SRVPGLHLGA 
GSSGVLNAVY AVARRPSLAL EKVAGTASLL REAYAEAWQL TPLTCPRCPG PWARVPANAA
AEPCEHSAEV RRYGDASPDL LFCATALHAA FPDALFVQVI RDGRDVIADM MEDERSLAWL
KPSFMKLDHE FPNHFFGLEE ESDLSAFTEG STAAKCAMRW RGAIRMSALL RRSIGAEQLM
TLRYEDVHGG EVEAAERLRE FTGARVSASE LLTAESWGVG SWRERLTRDQ YGDVRQVAGT
ELSRLGYT