Gene Ndas_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1399 
Symbol 
ID9245249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1713994 
End bp1714587 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003679337 
Protein GI297560363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.377036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00124362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACACCG TGCCCGGTAC CGCGACGACA CCGCTGACCC CGGCCGCGCG CCGCGTCCTG 
GACGTGGCGA CCGAGCTGTT CTACACCCGC GGGATCAACA CCGTGGGCAT GGAGCTGGTC
GCCGAGCGGG CGGGGGTCAC CAAGAAGACC ATCTACGACC GCTTCGGCTC CAAGCAGCAG
CTCGTCGTCC ACTACCTGCG CGCACGCGAC GCCCGCTGGC GCGCGTACCT GGACGGCTAC
CTGGAGCGGG CCCGGACCCC GAGGGAGCTG GTGGCCGCCA CGTTCGACGC CCTGGACGAC
TGGACGGGCG AGGAGAACCC GCGCGGCTGC GCCATGGTCA ACGCCTACGC CGAGCTCTCC
GACCCCGAAC ACCCCGGCCG CGCCGTCGCC GAGGAACAGA AACGGTGGCT GCGCGGCCTC
TACACCGACC TCGCCGAGCG GTCGGGCGCC AGGGACCCCG GGGCGCTCGG CGACGCGCTG
GCCATGCTGC ACGAGGGCGC CGTGGTGGCC CGCAACGTCA CCGGGGTCGC CGACGCCGCG
CGCACCGCCC GCGCCGCGGC GGACGCCCTG ATGACCGTGC ACGGCGCGGA CTGA
 
Protein sequence
MDTVPGTATT PLTPAARRVL DVATELFYTR GINTVGMELV AERAGVTKKT IYDRFGSKQQ 
LVVHYLRARD ARWRAYLDGY LERARTPREL VAATFDALDD WTGEENPRGC AMVNAYAELS
DPEHPGRAVA EEQKRWLRGL YTDLAERSGA RDPGALGDAL AMLHEGAVVA RNVTGVADAA
RTARAAADAL MTVHGAD