Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1394 |
Symbol | |
ID | 9245244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1709628 |
End bp | 1710809 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | transcriptional regulator, CdaR |
Protein accession | YP_003679332 |
Protein GI | 297560358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.684667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0014878 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACACG AACAGCGTGC CCGGGTCGGC GCCGAGCTGG CGCGGGAGCG GGCCGGGCTG GTCGAGCGCA TCGTCGCCGA GGTGCACGCC GAGGTCCCGG CCTACCGCGC GCTGCACGGG TCCCAGCTCA CCGAGGTCCG GGCGATCACC GGGTGGCTGA TGGGCCGCTC ACTGGAGCTG TGGGCGGCCG GGGCGACGCG GCTGCCGCCG GAGGACGTGG AGCGGCTGCG CGGCATCGGC CGGTCCCGGG CGGCCGACGG GCGTTCGATC GGCGCGGTGG TGCGCGCGCA CCGGGTGGGC TCGGCGGCGG CGGTGCGCCT GGTCGCCGAA CTCGCCTCCG ACCGGCTCGA CGCCGCCGAC GTGTTCGCCC TGGGCGAACT GTGGCTGACC TCGATCGACC AGATCTCCGA GAGCCTGTCC GCGGGCCACG CCGAGGCCGC GCGCCGCCTG GACGCGGACC TGGAGCGGGC CCGCCGGGCC TTCCTGGACG ACCTGCTGAT CGGACGGCAG GCCTCGCGCG GGGCCATCCG CGACCGGGCG CGGACCCTGG GCATCGCCCC GCCCGACCCG GCGGTGCTGG TGGTGGCCGA GGCCGACGGC GGCCCCTGCG ACGGGGCGCC GCGGTCGGCC GCGCTCGCCG CCGGGATGGA ACTGCTGGGC CTGGTGGAAC CGGCGGGCGC CGACCCGCTG GTGACCACGC GCTCGGGACG CGTGGTGCTG CTGGTCCGCC CCGACGACGC CGACCGGGTG GCCGCCGTGC TCGGCGGACG CCCCTGGCGC GGGTGCGTGC TGGAGCCGCG CGCGCTGACG GACATGTCGG CCGCCTACCG GCTGGCCGAC GGCGCCCTGG AGACCGCACC CGCGCACGCC TTCGACTCCC GGGGGCTGCT CGGGACCTCC GACGCGTGCG TGCTGGCACT GCTCAACGGC GGCCCGGTCG CCCCGGCCGC GGTCCGCCGC ACGGTGCTGG GGCCGCTGCT GGCCGAGGGC AACGCCCACC TGCTGGAGAC GCTGCGGGCC TACTTGCGCG AGGGCGCGGC GACCACGGCC GCGCAGGCGC TGCACGTGCA CGCCCAGACG CTGCGCTACC GGCTGCGCCG GGTGCGGGAG CTGACCGGGC ACGACCCGCA CCGGCCCTGG CAGCGGTTCG TGCTGGAGAC CGCCTGCGCG ATCGCGCCCT GA
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Protein sequence | MGHEQRARVG AELARERAGL VERIVAEVHA EVPAYRALHG SQLTEVRAIT GWLMGRSLEL WAAGATRLPP EDVERLRGIG RSRAADGRSI GAVVRAHRVG SAAAVRLVAE LASDRLDAAD VFALGELWLT SIDQISESLS AGHAEAARRL DADLERARRA FLDDLLIGRQ ASRGAIRDRA RTLGIAPPDP AVLVVAEADG GPCDGAPRSA ALAAGMELLG LVEPAGADPL VTTRSGRVVL LVRPDDADRV AAVLGGRPWR GCVLEPRALT DMSAAYRLAD GALETAPAHA FDSRGLLGTS DACVLALLNG GPVAPAAVRR TVLGPLLAEG NAHLLETLRA YLREGAATTA AQALHVHAQT LRYRLRRVRE LTGHDPHRPW QRFVLETACA IAP
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