Gene Ndas_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1334 
Symbol 
ID9245184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1639919 
End bp1640866 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679272 
Protein GI297560298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTC GACCCATCGA CATCACCGTG CCCGACCTGA CCGGAAAGCG CGCCGTCGTC 
ACCGGCGCCA GCGACGGGAT GGGCCTGGCG ATGGCCAGGC GGCTGGCCGC CGCGGGCGCC
GAGGTGATCA TGCCCGTCCG CAACCCGCGC AAGGGCGAGG ACGCGATCGC CAGGATCCGG
CAGACGGTGC CCCGCGCGAA CGTCTCGCTG CGCGGCCTCG ACCTGTCCTC GCTCGCCTCG
GTCGCCGCCC TCGGCGACAC CCTGCGTGAG GAGGGCCTGC CGATCCACAT CCTCATCAAC
AACGCCGGTG TGATGAGGCC CCCGAACCAG CAGACCACGA CCGACGGTCA CGAGCTCCAG
TTCGGGACCA ACCACCTCGG CCACTTCGCC CTGGTCGGCC ACATCCTCCC GCTGCTGCGC
GCGGGCCGGG CGCGGGTGAC TTCGCAGATC AGCGTCTCCG CGCGCCGCGG CTCCATCAAC
TGGGAGGACC TGAACTGGGA GCGCTCCTAC AACGAGATGC GCGCGTACAG CCAGTCCAAA
ATCGCGTTCG GGCTGTTCGG CCTCGAACTG GACCGCCGCA GCACGGCTCA CGGGTGGGGC
ATCACCAGCA ACCTCTCCCA CCCCGGGGTG GCCCCGACCA GTCTCCTGGC CGCCCGCCCC
GAGATCGGCC GCAGCGAGGA CACCCCGTAC ATCCGCCGGA TCCGGGCCCT GTCGGCCCGC
GGGATCCTGC TGGGCACCCT TGAGACGTCG AAGCTGCCCG CGCTCATGGC CGCGACCGAC
CCGGCCGCCA AGCGCGGCGC GCTCTACAGC CCCAGCGGCT TCGGAAGGCT GGGCGGCCCG
CCGTCCGAGC AGCGGCTGTA CCCGCCGCTG CGCAGCGCGC AGGAGGCCGC GCGCGTCTGG
CAGGTCTCCG AGGAACTGAC CAGGGTCTCC TTCCCCGCCG CCGTCTGA
 
Protein sequence
MPRRPIDITV PDLTGKRAVV TGASDGMGLA MARRLAAAGA EVIMPVRNPR KGEDAIARIR 
QTVPRANVSL RGLDLSSLAS VAALGDTLRE EGLPIHILIN NAGVMRPPNQ QTTTDGHELQ
FGTNHLGHFA LVGHILPLLR AGRARVTSQI SVSARRGSIN WEDLNWERSY NEMRAYSQSK
IAFGLFGLEL DRRSTAHGWG ITSNLSHPGV APTSLLAARP EIGRSEDTPY IRRIRALSAR
GILLGTLETS KLPALMAATD PAAKRGALYS PSGFGRLGGP PSEQRLYPPL RSAQEAARVW
QVSEELTRVS FPAAV