Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1333 |
Symbol | |
ID | 9245183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1638699 |
End bp | 1639538 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003679271 |
Protein GI | 297560297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGATC GCATCGGACT GGCGGAGTTC CTGCGCAACC GGCGTCAGGC ACTGCAGCCA GAGGACGTCG GCCTGCCGCG CGGGCAGCGC CGCAGGACCA ACGGCCTGCG GCGCGAGGAG GTCGCGTCGT TGTGCCACAT GTCGGCCGAC TACTACTCCC GCCTGGAGCG GGAACGCGGT CCCCAGCCGT CGCACCGGAT GCTCGCCTCG ATCGCCCAGG GGCTGCACCT GTCACTCGAC GAGCGCGACC ACCTGTTCCG CCTGGCCGGA CACAATCCGC CGCCCAGGGG CACGTCCAAC GAGCACGTCA GCCCCGGGCT CCTGCGTGTG CTCGACCGCC TGGACGACAC ACCCGCCGAG ATCGTCACCG AGCTCGGCGA GACCCTGCGG CAGTCCCCGA TGGGCGTCGC GCTGACCGGG GACGCGACGC GGTACACGGG GCCTGCCCGT AGCGCGGGGT ACCGGTGGTT CACCGATCCC GAATCCCGGC GGATCTACGC GCCGGAGGAG CACCCGTTCC TGACCCGGAT GTACGCCGCG GGGCTGCGTG AGCTCGTCAC CCTCCGCGGC CCGGAGTCCC CCGCCGCCCA GCTGGCCGAG CTGCTGCTGG CCCGCAGCGA GGAGTTCCGG CGGGTGTGGA GCGACCACGA GATCGGGATA CGTCCCCACG AGGTCAAGCA CTTCGTCCAC CCCGAGGTCG GCGCGCTGGA GCTGACCTGC CAGAGGCTGG TCGACCCGGG GCAGGCGCAC TCGCTGATGG TCTACACCGC CGTCCCCGGC ACCGAGAGCT ACGAGAAGCT CCAGGTGCTG TCGGTCATCG GGACGCAGAC GCTCAGCTGA
|
Protein sequence | MIDRIGLAEF LRNRRQALQP EDVGLPRGQR RRTNGLRREE VASLCHMSAD YYSRLERERG PQPSHRMLAS IAQGLHLSLD ERDHLFRLAG HNPPPRGTSN EHVSPGLLRV LDRLDDTPAE IVTELGETLR QSPMGVALTG DATRYTGPAR SAGYRWFTDP ESRRIYAPEE HPFLTRMYAA GLRELVTLRG PESPAAQLAE LLLARSEEFR RVWSDHEIGI RPHEVKHFVH PEVGALELTC QRLVDPGQAH SLMVYTAVPG TESYEKLQVL SVIGTQTLS
|
| |