Gene Ndas_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1333 
Symbol 
ID9245183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1638699 
End bp1639538 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003679271 
Protein GI297560297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGATC GCATCGGACT GGCGGAGTTC CTGCGCAACC GGCGTCAGGC ACTGCAGCCA 
GAGGACGTCG GCCTGCCGCG CGGGCAGCGC CGCAGGACCA ACGGCCTGCG GCGCGAGGAG
GTCGCGTCGT TGTGCCACAT GTCGGCCGAC TACTACTCCC GCCTGGAGCG GGAACGCGGT
CCCCAGCCGT CGCACCGGAT GCTCGCCTCG ATCGCCCAGG GGCTGCACCT GTCACTCGAC
GAGCGCGACC ACCTGTTCCG CCTGGCCGGA CACAATCCGC CGCCCAGGGG CACGTCCAAC
GAGCACGTCA GCCCCGGGCT CCTGCGTGTG CTCGACCGCC TGGACGACAC ACCCGCCGAG
ATCGTCACCG AGCTCGGCGA GACCCTGCGG CAGTCCCCGA TGGGCGTCGC GCTGACCGGG
GACGCGACGC GGTACACGGG GCCTGCCCGT AGCGCGGGGT ACCGGTGGTT CACCGATCCC
GAATCCCGGC GGATCTACGC GCCGGAGGAG CACCCGTTCC TGACCCGGAT GTACGCCGCG
GGGCTGCGTG AGCTCGTCAC CCTCCGCGGC CCGGAGTCCC CCGCCGCCCA GCTGGCCGAG
CTGCTGCTGG CCCGCAGCGA GGAGTTCCGG CGGGTGTGGA GCGACCACGA GATCGGGATA
CGTCCCCACG AGGTCAAGCA CTTCGTCCAC CCCGAGGTCG GCGCGCTGGA GCTGACCTGC
CAGAGGCTGG TCGACCCGGG GCAGGCGCAC TCGCTGATGG TCTACACCGC CGTCCCCGGC
ACCGAGAGCT ACGAGAAGCT CCAGGTGCTG TCGGTCATCG GGACGCAGAC GCTCAGCTGA
 
Protein sequence
MIDRIGLAEF LRNRRQALQP EDVGLPRGQR RRTNGLRREE VASLCHMSAD YYSRLERERG 
PQPSHRMLAS IAQGLHLSLD ERDHLFRLAG HNPPPRGTSN EHVSPGLLRV LDRLDDTPAE
IVTELGETLR QSPMGVALTG DATRYTGPAR SAGYRWFTDP ESRRIYAPEE HPFLTRMYAA
GLRELVTLRG PESPAAQLAE LLLARSEEFR RVWSDHEIGI RPHEVKHFVH PEVGALELTC
QRLVDPGQAH SLMVYTAVPG TESYEKLQVL SVIGTQTLS