| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1314 |
|---|
| Symbol | |
|---|
| ID | 9245164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1620316 |
|---|
| End bp | 1620978 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transposase IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_003679256 |
|---|
| Protein GI | 297560282 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCACCA CCGACCGGCC CCCGGTCTGT TGCGGGATCG ACTGGGCAGA AGACCATCAC
GACACCGCCC TCATCGACGC AGACGGCCAC CTGCTGGCCA AGCAGCGCAT CACCGACGAC
GCCCAGGGCC TGGCCCTGCT CCTGGAGTTG CTCGCCGAAC ACGAGAGCCC CGAGGATCCG
CTTCCGGTCG CTATCGAGAC CAGCCGCGGC CTGCTGGTCG CCAGCCTGCG CGCCTCGGGC
CGCACCGTCT ACTGCATCAA CCCGCTCGCG GTGGCCCGCT ACCGCGAGCG CCACTCCGTC
GCCCGCGCCA AGTCCGACCA CGCCGACGCG ATGACCTTGG CGAACGTGCT GCGCACCGAC
CTGCATCGCC ACCGGCCCCT CCCCGCGGGC TCCGAGCAGG CCCAGGTCAT GCACCGCCGC
GTCAAGAACC AGCGGCTGGC CGCTGCGGGT TACGTCTGGA CCTTCGCCAG CCTCCAACGC
TCCGGTCCCC GCGCCCATTA CGACCGGCGC CGAGAGGCCG GGGACCGCCA TGCCAGCGCC
CTACGCAACC TCTTCAACCG GTTCCTGAGC TGCCTGTTCC ACTGCCTCCA GCACGGCGTC
CCCTACGACG AGACCACCGC CTTCCCGAAC CCGCTCGAAC CCGGGCTGCG GGTCGTGGCT
TGA
|
|---|
| Protein sequence | MTTTDRPPVC CGIDWAEDHH DTALIDADGH LLAKQRITDD AQGLALLLEL LAEHESPEDP
LPVAIETSRG LLVASLRASG RTVYCINPLA VARYRERHSV ARAKSDHADA MTLANVLRTD
LHRHRPLPAG SEQAQVMHRR VKNQRLAAAG YVWTFASLQR SGPRAHYDRR REAGDRHASA
LRNLFNRFLS CLFHCLQHGV PYDETTAFPN PLEPGLRVVA
|
|---|
| |