| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1298 |
|---|
| Symbol | |
|---|
| ID | 9245148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1603476 |
|---|
| End bp | 1605038 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003679242 |
|---|
| Protein GI | 297560268 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG TGTACGCGGG GTTGCGGCTG CGTCCCGGCG GACGCGCACG AAGCGGCTAC
GCGGCGGTCA AGGTCATCCG GGAGGAACTC ACCGAGGATC CGGACTTCCG CGCCCGGTTC
ACCCGCGAGA TCCGCCTCCT CAGCCGGGTC CGCAGCCGGT CGGTCCCGGA GTTCCTGGGC
TCCGGCCAGG ACGCGCACGG GCCGTGGCTG GTCACCGAGT TCGTGCCCGG GTTGTCGTTG
TCCGCGCACG TCAGACAGCA CGGGCCACTC CCGCCCAACC TTCTCCTCGG GCTGGCCGCC
GGGGTCGCCG AGGCCCTGAA CGCCGTGCAC ACGGCCGGGA TCGTGCACCG CGACCTCAAA
CCCGGCAACG TCATGCTCGC CCCCGAGGGC CCCAAGGTGC TGGACTTCGG TATCGCCCGC
GCCGTCGACG AAACCGCGCT GACCCGCACC GGCAGCCTGG TGGGCACCCC CGGATGGATC
GCCCCGGAGG TACTGCGCGG AGCACCGGCC GCGCCACCCG CCGACCTGTT CGCCTGGGGC
GCTCTGATGG CCTACGCCGC CACCGGCCGC GCGCCCTTCG GTTCGGGTTC CACGGACTCC
CTCCCCTCCC AGATGCTCGA CCAGCCGCCG GACCTGGCCG GAGTGCCCGG ACCACTGCTG
CCGCTGGTGA CCGCCGCGTT GAACCCTGAC CCGCGCCAGC GCCCCACGGC GGCCCAGGCC
GCCCGCGCCT TGGTCGCCCT GGGCCAGGGA CAGGGGCGGG AACAGGGGCA GGGGGCGGGG
CGGCAGAAGC AGGGCGTTCC GCTGGACGGG TCAGGGCTGT CGAACGCGGT GGGGGCCCTC
CTGGACCGGG AGTGGCGGGG TGTGCGTGCC GTGCGGCCGC CCGCTCCGCC TCGCCGGGTG
CCCAAGGCCC TGGTGGTGGC CAGCGCCGCC GTCCTGCTGC TGGGCACGGT GGGCGGTGGG
TTCCTGGCGG CCCAGGTGCT CTCGCCAGAC GGCGGTGAGA GCGAGGGAAC CGGTGAGGGT
ACAGCCGCGG AGGGGACGGA AGAGGGTTCA GGGGCGGGAG GGCCGCAGGA GGTAAGGGGT
TCGGGAGAGG AAGGTACGGA GGGACCCGAC ACGGAATGGG TGATGCCGGA ACCGACGCCC
TTCGGCACCA ACGCCGAATG GCTGGCGGAG GTGATCACCT CGCCGAACGG CATGCCGACC
TTCCAGGCCA CCCCTGACTC GTACGAGACG CTCTTCCACC TCTCCGTGAG CTCCGTGGAG
GAGGTCCCCG AGGGGGTGCG CTTCACCGTG CTCGTCGGGA ACCTGGTCGA GGGCCACAGC
GCCTCCGTGC CTGAGCTGTT CACGGTGCCC ACTCCTGAGG GCCCGATCGA GCCGGAGGAG
GCCCCCGGAC CGGTCTCGGT CGGCGACAGG CTCGTCCTCA CCTTCCCGGG TGCTCCCGAG
CGGGGCCCGC TCACCTTCGG AGACCCCGAC TTCGTGCCGG GTGTCTCCGG GATACCGCCG
GTCAGCCAGT GCTACGACGC CGCAGCCGGA AGCGCGTCCG TGGATTACGA CTCCTGTCCC
TGA
|
|---|
| Protein sequence | MGTVYAGLRL RPGGRARSGY AAVKVIREEL TEDPDFRARF TREIRLLSRV RSRSVPEFLG
SGQDAHGPWL VTEFVPGLSL SAHVRQHGPL PPNLLLGLAA GVAEALNAVH TAGIVHRDLK
PGNVMLAPEG PKVLDFGIAR AVDETALTRT GSLVGTPGWI APEVLRGAPA APPADLFAWG
ALMAYAATGR APFGSGSTDS LPSQMLDQPP DLAGVPGPLL PLVTAALNPD PRQRPTAAQA
ARALVALGQG QGREQGQGAG RQKQGVPLDG SGLSNAVGAL LDREWRGVRA VRPPAPPRRV
PKALVVASAA VLLLGTVGGG FLAAQVLSPD GGESEGTGEG TAAEGTEEGS GAGGPQEVRG
SGEEGTEGPD TEWVMPEPTP FGTNAEWLAE VITSPNGMPT FQATPDSYET LFHLSVSSVE
EVPEGVRFTV LVGNLVEGHS ASVPELFTVP TPEGPIEPEE APGPVSVGDR LVLTFPGAPE
RGPLTFGDPD FVPGVSGIPP VSQCYDAAAG SASVDYDSCP
|
|---|
| |