Gene Ndas_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1287 
Symbol 
ID9245137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1594575 
End bp1594925 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003679231 
Protein GI297560257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG TCGTGCTCAC GAACTGTCCG GCCGGGCTGC GCGGGTTCCT GACCCGGTGG 
CTCATGGAGA TATCGGCGGG GGTGTTCATC GGCAACCCTT CGCGCCGGAT CCGGGAGGCG
CTGTGGGCGG AGGTGAAGGA GTACGCGGGG AACGGGAGGG CGTTGCTGGC GTACAGCGAC
GACTCCGAGC AGGGCTTCAC CTTCCAGACC TTCGAGCGTC ACTGGGAGCC GGTGGACCAT
GAAGGGCTCA CCTTGATGCA TCGCCCCAAG AAGGTGCAGG AGGAGAACAG AAGGCCTCCG
AAGAGCGGGT GGAGCAAGGC GTCGAAGAGG CGGCGCTTTG GTGGGAGGTG A
 
Protein sequence
MTVVVLTNCP AGLRGFLTRW LMEISAGVFI GNPSRRIREA LWAEVKEYAG NGRALLAYSD 
DSEQGFTFQT FERHWEPVDH EGLTLMHRPK KVQEENRRPP KSGWSKASKR RRFGGR