Gene Ndas_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1286 
Symbol 
ID9245136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1593595 
End bp1594578 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content72% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003679230 
Protein GI297560256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGACCG TGGGAAGGCG CAGGACCTCG GGGCCGCGTG AGCTGACGAG GGTGGGTGAG 
CGGCTGTCGT TCCTGTACTT GGAGCGGTGC GTCGTGCACC GCGACTCCAA CGCCATCACC
GCCGAGGACG GGGACGGGAC GCGCTACCTG CCGTCCGCGA CCATCGGCAC GCTGCTGCTG
GGCCCGGGGA CGAACGTGAC CCACTCGGCG ATGAGCCTGC TCGGCGAGTG CGGGGCGACG
GTGGTGTGGG TGGGGGAGCA CGGGGTGCGC TACTACGCGG CCGGGCGCGC GCTGACGCGG
TCCTCCCGGT TGGTGGAGGC GCAGGCGACG GCGTGGGCGA ACCGGCGGAG CAGGCTCGAC
GTGGCGCGGG CGATGTACCG GATGCGCTTC CCGGACCTGG ACGTGGAGGC GCTGAGCCGT
CAGGCGCTGC TGGGCAAGGA GGGCGACCGG GTCAAGGCGT GTTACCGGGA GCAGGCGGCG
CGGACCGGTG TGACCTGGCG CGGGAGGAGG TACGTGCCGG GCGACCACGA CGTCTCGGAC
CCGCCGAACA AGGCCATCAC CGCGGCGGCG CAGTGCTTCT ACGGGGTCGC GCACGCGGTG
ACGGCCGCGC TCGGGTGCAG TCCGGGACTG GGGTTCGTGC ACTCGGGGCA CGAGCGCGGA
TTCGTGATGG ACGTGGCCGA TCTGTACAAG GTGGAGATCG GGATCCCCGT GGCCTTCGAC
GCGGCGGCGC AGGGGGACGA GGACGTGGAC GGGGTGACGC GCAGGCTGCT GCGGGACCGG
ATCAACGAGG AGGGGCTGCT GGAGCGGTGC GTGCGCGACA TCAAGGCTCT GTTGCTCGGT
GAAGGATCGG TTGGGGCTCA GGGCGAGGCC GAGGATGCGG GCGAGAGCGC GAACGACGAC
GTGGCGGACA CGGTCGGCCT GGTGGGCGAC CGGGGTGAGC TGCTGGAGTC GGGTTACAGC
TATGCCGACG AGGTGGTCTG GTGA
 
Protein sequence
MGTVGRRRTS GPRELTRVGE RLSFLYLERC VVHRDSNAIT AEDGDGTRYL PSATIGTLLL 
GPGTNVTHSA MSLLGECGAT VVWVGEHGVR YYAAGRALTR SSRLVEAQAT AWANRRSRLD
VARAMYRMRF PDLDVEALSR QALLGKEGDR VKACYREQAA RTGVTWRGRR YVPGDHDVSD
PPNKAITAAA QCFYGVAHAV TAALGCSPGL GFVHSGHERG FVMDVADLYK VEIGIPVAFD
AAAQGDEDVD GVTRRLLRDR INEEGLLERC VRDIKALLLG EGSVGAQGEA EDAGESANDD
VADTVGLVGD RGELLESGYS YADEVVW