Gene Ndas_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1282 
Symbol 
ID9245132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1590144 
End bp1590845 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_003679226 
Protein GI297560252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA CGAGCACCGC CGAGTTCGTG CCCGGGCTCA AGGACGTCGG TGCGCTGGTC 
GACGAACGCG TCCGCCAGCT CCAGGGCGGC TACCTCAAGG ACCTCCCCGA AGCCGTCGCC
ACCCTGGCCA AGCTGCGCCG GGGCGCGGGC AAGCCCATCG AGGCCGTACC GGAGCTGGTG
GGGCTGACGC TGGACCACCG CTTCTACGAG CGCTTCTCCG TCGCCGACCC CCGCATCGAG
GACGCCGAGG CCGCCGCGCA CGAGGCGCTG ACCCTCTACG CCCTGCACCA GCAGTCCAAG
CGCGAGAGGG GCATGCACCG GCGCGGACGC GACCTCGGCG GGGCCGTCCG CCGACTCATG
CCCACCGGGG ACATCGACGA GCCGTTGCGC AGGAGGTTCG TGCAGGCGGG GAGCGCCGTG
CACCACGCCA CCCGCCTCGA CCGGCTCCGG GGGATCGTCC AGCTCCTGCG CGCCGAGGAC
GTCCCGCTCG ACTACGGACT CCTGGCCGAC CAGCTCCACG ACGCCCGCAC CCGCCCCGGG
GCCGAACACG TGCGCCGGGC CTGGGGGCGC GGCTTCCAGG CCTACCGGCA CTCGGAGGGC
ACCGACGCGG GCGGTATCGA CACGGGCGGC ACCGAGGCCG ACGACGCCAC CGGCCACCAG
GGCCGCCAGG GCACGGAGAC CGCGACCGGC GCCTCCGACT GA
 
Protein sequence
MTTTSTAEFV PGLKDVGALV DERVRQLQGG YLKDLPEAVA TLAKLRRGAG KPIEAVPELV 
GLTLDHRFYE RFSVADPRIE DAEAAAHEAL TLYALHQQSK RERGMHRRGR DLGGAVRRLM
PTGDIDEPLR RRFVQAGSAV HHATRLDRLR GIVQLLRAED VPLDYGLLAD QLHDARTRPG
AEHVRRAWGR GFQAYRHSEG TDAGGIDTGG TEADDATGHQ GRQGTETATG ASD