| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1277 |
|---|
| Symbol | |
|---|
| ID | 9245127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1582244 |
|---|
| End bp | 1584016 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003679222 |
|---|
| Protein GI | 297560248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.412647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAGCG CCCTGCGCTT CGTCCTCACG ACCGGATACC GCACCGACCG GTTCCGTTCC
CTGATCGTGG TGGCGGTGGC GCTTCTCGAA CAGGCCACCG GGATCGGCCT CGCGGTGGCG
ATCGGACTGT TCAGCGAAGT GGCGAGCGGA GGCTCGGCCA GCGGCCTGGT GGTGCTCGCG
CTATGTGTGG CGGTCTTCGT CATGCTCACC CAGGGCACCT TCATCGCCGG TTACTTCACC
CGCCTGCGCC TACAGGAGGA GATCCAGAAC GAGGTCGAGC GCCGGTTCAT CGACGTGGTC
GGCACGACGC CGACGTTGGA GGTCCACGAG CGTTCGAGCC GCTCCGACAG GGCGGCGGTG
GTCCGCGGTG CACGGGGCGA GATCGGCCCG GGCTTCGACC GGCTGATGTG GCTGGCCGGA
GCCGCGCTGG CCCTGATCAC CTCGGCCGCC CTGATGGCCT CGGTCGTCCC CGTCCTGGCC
CTGCTGCCGC TTTTCGCCGT CCCCGCGGTG CTGGCCACCC GAGCGGCGGA CAGGAAGCGC
GGTCGGGCCG TGGAGCGTGC CACGCCCCGG ACCCGGTTGG CCGGTCACCT GTTCACGCTC
GCCACGACGG CCGCACCCGG CCGCGAGACC CGCCTCTTCG GGCTGGCGGG TGAACTGCGG
CGCAGGCACC GCGAGGAGTG GGACGCCGGA GGCCGGGACA TCACCCGGAC CGATCGGCTG
GCCCGGGTAC CGGTCGCGCT GGCCTGGCTG CTCTTCGTGC TGGCGTACGC GACCGCCGTC
GCCCTGATGG TGCGGGCCGG GCTGTCCGGC GACGCCCCGC TCGGCCTCAT CGTCGCGGCC
GTCGCCGTCA GCAGCCAGAT CACCGGCCAG GTGCAGAGCC TGCTGAACCT GTCCTTCTGG
TCGCTGGAGT CGCTTCGGGC GACCCGGGCG TTCCTCGACG TGGTGGAGGA GGGCACCGCG
GAGCGGGCGG CCCTCATGCC GACCACGCCG GTGGCGGTGC CCGCCCGGCT GGAGAGCGGC
ATCAGGGTGG AGGGTCTGGG TTTCCGGTAC TGGAACCGCG ATCAGCCCGC GCTGAGCGGC
ATCGACCTCG AACTCCCGGC TGGCACCGTG GTGGCGCTGG TCGGCGAGAA CGGCGCGGGC
AAGTCGACGC TGGTCAAGAT GCTCAGCGGC CTCTACCAGC CCGGTGAGGG GCGCGTCCTG
GTGGACGGGA CCGATCTCGC GCGGTTCGCC CCGGAAGAGT GGCGCGCCCG GATCACGGCG
GCCTTCCAGG ACCCGGTGCG CATCGAGATG TCCCTGCGGG ACGCGGTCGG GCTGGGGCGG
ATCGAGCATC GCGACGACCC TGAGCGGGTC ATCGAGGCGC TGCGGACGGT CGGCGGGGAC
GGGCTCCTCG CCTCGCTGCC CGGGGGCCTG GACACCCGGC TCGGGCGCGG GTCGTGGGAC
GGCGAGGGGC TGTCCGGGGG CCAGTGGCAG ACGGTCGCCA ACGCCCGTGC GGCGATGCGG
CGGGCGCCGC TGCTGCGGAT CATGGACGAG CCCACCGCCA GCCTCGACGC ACGGGCTGAG
GAGCGGCTGT TCCAGCAGTA CGCCGACCTG GGCCGCCAGG AGGGCGGTGT GACCGTCCTT
GTCACGCACC GCTTCACGAC CGCCCGGGCG GCTGATCTCA TCGTGGTCCT GGACGGCGGC
CGGGTCGTGG AGACCGGCAC CCACGACACG TTGAGCCGGG CCGGTGGGCT CTACGCCGAG
CTGTTTCGCC TCCAGGCGCG GTACTTCGTC TGA
|
|---|
| Protein sequence | MISALRFVLT TGYRTDRFRS LIVVAVALLE QATGIGLAVA IGLFSEVASG GSASGLVVLA
LCVAVFVMLT QGTFIAGYFT RLRLQEEIQN EVERRFIDVV GTTPTLEVHE RSSRSDRAAV
VRGARGEIGP GFDRLMWLAG AALALITSAA LMASVVPVLA LLPLFAVPAV LATRAADRKR
GRAVERATPR TRLAGHLFTL ATTAAPGRET RLFGLAGELR RRHREEWDAG GRDITRTDRL
ARVPVALAWL LFVLAYATAV ALMVRAGLSG DAPLGLIVAA VAVSSQITGQ VQSLLNLSFW
SLESLRATRA FLDVVEEGTA ERAALMPTTP VAVPARLESG IRVEGLGFRY WNRDQPALSG
IDLELPAGTV VALVGENGAG KSTLVKMLSG LYQPGEGRVL VDGTDLARFA PEEWRARITA
AFQDPVRIEM SLRDAVGLGR IEHRDDPERV IEALRTVGGD GLLASLPGGL DTRLGRGSWD
GEGLSGGQWQ TVANARAAMR RAPLLRIMDE PTASLDARAE ERLFQQYADL GRQEGGVTVL
VTHRFTTARA ADLIVVLDGG RVVETGTHDT LSRAGGLYAE LFRLQARYFV
|
|---|
| |