Gene Ndas_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1264 
Symbol 
ID9245114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1567633 
End bp1569102 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content75% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003679209 
Protein GI297560235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.781234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC CCCGCACCAA CACGCGTCGT GGCCGCCCCT CCGGTGGCTA CGGCCGTCAG 
CGCCCCCACC AGTCCGGCGG CCGCCCCCAG CGCGGCGGCT TCGGCGGACG TTCGGCGGGA
CGCTCCTCCG GGGAGTTCGC GCTCCCCGTC TCCACCACCC CCGCACTCGA CCCGGTCCAC
GCCTTCGAGG ACCTGGAGAT GCCCGCGCAG CTGAAGTCGA CGCTGGCCCG CCAGGGCCTG
ACCACCCCGT CGGCCATCCA GGCGGCGACG CTGCCCAACT CGCTGGCCGG ACGCGACGTC
CTGGGCCGCA GCCAGACCGG TTCGGGCAAG ACCCTGGCCT TCGGTCTGGC GCTGCTGGCC
CGCCTGGAGG GCCGCGTGGC CGAGCCCCGC CGCCCCCTGG CCGTGGTGCT CGCGCCGACC
CGCGAACTCG CCCAGCAGGT GAACGACTCG CTCGCCCCCT ACGCCCGTTC GCTGCGCGTG
CGCACGACGA CCGTGGTGGG CGGCATGCCC ATCAGCCGCC AGTCCCGCGC CCTGCGCCAG
GGCGTGGAAC TGGTCGTGGC CACCCCGGGC CGCCTGCGCG ACCTGATGGA GCGCGACGAC
TGCGTTCTGG ACCAGGTGGA CGTCACCGTC CTGGACGAGG CCGACCAGAT GACCGACATG
GGCTTCATGC CGCAGGTCAC CGCGATCCTG ACGGAGGTGC CGACCGGGGG CCAGCGCATG
CTGTTCTCGG CCACCCTGGA CCGCAACGTC GACACCCTGG TCCGCCGCTT CCTGAACGAC
CCGGTGGTCC ACTCGGTGGA CCCGTCCGAG GGCGCCGTCT CCACCATGGA GCACCACGTC
CTGCACGTGT CGCACGCCGA CAAGCAGGAC GCCGCCACCC GCATCGCGGC CCGCGACGGG
CAGGTCATCC TGTTCCTGGA CACCAAGCAC GCCGTGGACC GGATGGCCAA GCACCTGCTC
AACAGCGGAG TCCGGGCGGC ACCGCTGCAC GGCGGGCGGT CCCAGCCCCA GCGCACCCGC
ACCCTCAAGC AGTTCAAGGA GGGCACGGTG ACCGCGCTGG TCGCCACCAA CGTCGCCGCG
CGCGGCATCC ACGTGGACGG GCTGGACCTG GTGGTCAACA TCGACCCGCC CACCGACCAC
AAGGACTACC TGCACCGGGG CGGACGCACC GCGCGCGCGG GTCAGACGGG CAGCGTGGTC
ACGCTCGTGC TGCCCAGCGA GCGGCGGGAC ATGGACAGGC TGATGCGGCT GGCCCGGATC
GACGCGCACG TCGCCCAGGT GAGCGCCAGC GACCCCGAGC TGGCCCGGGT GACCGGCGCC
CGGGAGCCCT CCGGGGTCCC GGTGTCCCTG CCCAGCGGCC CGCGGGAGGA GCCGCGCCGC
CAGGGCGGCC GCGGATCGGC CTCGCGCGGC GGTTCGGCCT CGCGCGGCGG GTCGGCCTCG
CGCCGCCGCG GCCCCCGCCG CCCGGCCTAG
 
Protein sequence
MNQPRTNTRR GRPSGGYGRQ RPHQSGGRPQ RGGFGGRSAG RSSGEFALPV STTPALDPVH 
AFEDLEMPAQ LKSTLARQGL TTPSAIQAAT LPNSLAGRDV LGRSQTGSGK TLAFGLALLA
RLEGRVAEPR RPLAVVLAPT RELAQQVNDS LAPYARSLRV RTTTVVGGMP ISRQSRALRQ
GVELVVATPG RLRDLMERDD CVLDQVDVTV LDEADQMTDM GFMPQVTAIL TEVPTGGQRM
LFSATLDRNV DTLVRRFLND PVVHSVDPSE GAVSTMEHHV LHVSHADKQD AATRIAARDG
QVILFLDTKH AVDRMAKHLL NSGVRAAPLH GGRSQPQRTR TLKQFKEGTV TALVATNVAA
RGIHVDGLDL VVNIDPPTDH KDYLHRGGRT ARAGQTGSVV TLVLPSERRD MDRLMRLARI
DAHVAQVSAS DPELARVTGA REPSGVPVSL PSGPREEPRR QGGRGSASRG GSASRGGSAS
RRRGPRRPA