Gene Ndas_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1258 
Symbol 
ID9245108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1562253 
End bp1563155 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003679203 
Protein GI297560229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCCG TGACCGAGGC GGGGCCGCCG GCCCCGGAGG AGGGAGGCGT CATGGCGTCC 
GTGACCGAGG TGGAACGTCC GGTTCCGGAG GAGCCCGGAC CCCTGGCGCG GACGCGCTGG 
GCGGTGGCCG ACACCTGGGT GGTGGCGCGC CGCTACCTGC TGCACCTGGT GTACAAGCCC 
GACGAACTCG TCGGCACGCT GATGGTCCCC GTCCTGGCCG TGCTGCTGTT CGGCTTCGTC 
TTCGGCGAGG CCATGGGCGC GGTCATGGAC GCGCCCGGCG AGGAGTACCG CGAGTTCCTG 
ATGCCGGGGC TGTTCGCGCT GACCATGGCC TTCGGGATCG GCAACACCAC GATCGCGGTG 
GTCACCGACG CCGGGCGCGG CGTGGTCGAC CGGTTCCGCA CGCTGCCGAT GGCCCCCGCC 
TCCCTCCTGG CCGGGCGCAG CCTGGCCGAC GTGCTCTCCG CGGTGGTGGA CCTGGCCGTG 
CTGGCCGGAA TGGGGCTGCT GGTCGGCTGG CGGTGGCACG AGGGCCCGCT CTCCGCGCTG 
GCGGCCCTGG GGCTGCTGTT GCTGCTGCGC CTGGCCTTCA CCTGGATCGG CATCTACCTG 
GGGCTGGTGG TGCGCAGTCC GGAGGCGGCG ATGAAGTTCT TCTCGCTGGT CTTCCCGCTG 
GCCATGGTCG CGGACACCTT CGTGCCCACC GACACCATGC CGGACTGGCT GGTGCCGGTG 
GCCGAGTGGA ACCCGTTGTC GGCGACGGTG ATCGCGGCCC GCGACCTGTT CGGCAACCCG 
GTGGCGGCCA ACGACTCCTG GATCGCGCAG AACGCGCTGC TCATGGCAGT GGTGTGGCCG 
CTGGTGCTGA TGATGGTCTT CGTGCCGCTG GCGCTGCGGC GCTTCCGGCG GCTGAGCCGC 
TGA
 
Protein sequence
MMSVTEAGPP APEEGGVMAS VTEVERPVPE EPGPLARTRW AVADTWVVAR RYLLHLVYKP 
DELVGTLMVP VLAVLLFGFV FGEAMGAVMD APGEEYREFL MPGLFALTMA FGIGNTTIAV 
VTDAGRGVVD RFRTLPMAPA SLLAGRSLAD VLSAVVDLAV LAGMGLLVGW RWHEGPLSAL 
AALGLLLLLR LAFTWIGIYL GLVVRSPEAA MKFFSLVFPL AMVADTFVPT DTMPDWLVPV 
AEWNPLSATV IAARDLFGNP VAANDSWIAQ NALLMAVVWP LVLMMVFVPL ALRRFRRLSR