| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1223 |
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| Symbol | |
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| ID | 9245073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 1523929 |
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| End bp | 1525287 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003679168 |
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| Protein GI | 297560194 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00198137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAGCG GACACGACGC CGGATACGAC ATCACCGACG GCTACTTCCT GGACACCGAC
CGGGCCCGCA CCGTGGCCGA CCGCGTGGAG CGGACCGTCA CCGAGGCCAC CCGGCGGCTC
AGCGAGGAGA CCCGCGGCCA ACCCGAGGAC ACGCCCGAGG AGTACCGCGC CCGCGCCGAA
CGCGTCATCG CCCAGATCCT CGACGAGGAC GCGAGCCGCG CCCTGTCCGA GGGCAGGCAG
GTGCTCGACG CCACTACCGA GGCCTCCGTC GCCGCTGGCG CCCTGGCCCG GGTGTGCGGG
CTCGGACCCC TCCAGCCGCT CCTGGACGAT CCCGGGATCG AGAACATCAA CATCAACGGC
GTGCACGTGT GGGTGCGCCG CGCCGACGGA AGCCGCGAGC GGCACGACTC CCTCTTCGAC
GACCCCGACG AGGTCGTCGC CCTGGTCCGG CGCCTGGCGT CGGAGTCCGC CACGGGGGAG
CGCCGCTTCG ACCCGGGCGC GCCCATCCTC GACATGCAGC TGCCCGGCGG CGAGCGCCTC
AACGCGGTCA TGGAGGTCGC CCGGCAGCCC TCGGTGTCCA TCCGCCGCCA CCGCTACGGC
CGCACCACCC TCGAACAGCT CCACGGACTG GGCACGATCG ACGACACCCT GGTCGCCCTG
CTGCGCGCGG GGGTGCGCTC CCGCCGCAAC ATGGTCATCA CCGGCGGCAC CGGCGCGGGC
AAGACCACCC TGCTGCGGGC CCTGGCCGCC GAGATCCCCG TGGACGAACG CCTCGTCACC
ATCGAGGACG TCTTCGAACT CGGGCTGGAC CGCGACCGCG ACGCCCACCC CGACTGCGTC
GCCCTCCAGG CCCGACCGGC CAACGTCGAG GGCGTCGGCG AGATCACCAT CGCCGACCTG
GTGCGCACGG CCCTGCGCAT GTCGCCGGAC CGGGTCATCG TCGGTGAGAC GCGCGGCCAC
GAGACCGTCC CGCTGCTCAA CGCCATGAGC CAGGGCAACG ACGGCAGCCT CACCACCCTG
CACGCCGCCA ACTCCGCGGG CGCCTTCACC AAGCTGGGCG CCTACGCCGC CCAGTCCGCC
GAGCGCCTGC CCCTGGACGC CACCGCGTCC CTGGTGGCCG CCGCCGTGCA CCTGGTCGTG
CACGTGTCGG CGCTGCCCAC GGGCGGGCGC ATGGTCACGA GCGTGCGCGA GGTGGTGGGG
GCCGAGGGGC AGAACGTGGT CTCCAACGAG ATCTACCGGC GCGACCGCAA CGGGCCCCTG
CCCGCGGCGC CGCCCAGCCC CAACACGCTC GACGCCCTGG CCGAGGCCGG GTTCGACCCG
GCGATGCTGA GCCCGGACAC AGTGGGGTGG GCACGGTGA
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| Protein sequence | MSSGHDAGYD ITDGYFLDTD RARTVADRVE RTVTEATRRL SEETRGQPED TPEEYRARAE
RVIAQILDED ASRALSEGRQ VLDATTEASV AAGALARVCG LGPLQPLLDD PGIENINING
VHVWVRRADG SRERHDSLFD DPDEVVALVR RLASESATGE RRFDPGAPIL DMQLPGGERL
NAVMEVARQP SVSIRRHRYG RTTLEQLHGL GTIDDTLVAL LRAGVRSRRN MVITGGTGAG
KTTLLRALAA EIPVDERLVT IEDVFELGLD RDRDAHPDCV ALQARPANVE GVGEITIADL
VRTALRMSPD RVIVGETRGH ETVPLLNAMS QGNDGSLTTL HAANSAGAFT KLGAYAAQSA
ERLPLDATAS LVAAAVHLVV HVSALPTGGR MVTSVREVVG AEGQNVVSNE IYRRDRNGPL
PAAPPSPNTL DALAEAGFDP AMLSPDTVGW AR
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