Gene Ndas_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1221 
Symbol 
ID9245071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1522488 
End bp1523159 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content78% 
IMG OID 
ProductSAF domain protein 
Protein accessionYP_003679166 
Protein GI297560192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00137916 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACACGA AGACGGCACC GGCCCCCGCG GCCTCCCCGC GGCAGGGGGA GACCCCTCCG 
GTGCGGCTCC TGGGCAGCGG ACCCCGCCGC TGGCGGTGGC TGGTCCTGGC CCTGGGCATG 
ATGACCGCGG GCGGCCTGAC CGGTGTTGTG GCCCTTGAGC AGATGGACGA CCGGCAGGGC 
GTGCTCGTCG CCGACACCGA CCTGCCCGCG GGCCACGTGG TGACCGCGGA GGACCTGCGG 
GTCGCGCGGA TCTCCGTCGC CGACGGGGTC TCCTTCGTCG GCGCCGACCG CCTGGAGGCG 
ACCGTCGGCC AGACCCTCAC CGTGCCCGTC ACCGAGGGCG GCCTCCTCCC CGAGGCCGCC 
CTGGGCACCG AGGCCGCCTT CCCCGAGCGG GACCGCGCCG TGCTCGGTGT GGCCCTGCGC 
GTGGGCCGCT TCCCCGCCTC GATCGGCCCC GGCGCCGCGG TCTCCGTGGT GGTCCACCCC 
GAGGAGGGCG CCACGGGCGG CGGCGTCGAG GCCTACCGCG CGCTCGTGCG CGACGTCCAG 
CCCTCCGCCG CCGAGGACGG CTCGGTGGAA CTCGAACTCG TCGCGTCCTC CGCCGACGCC 
GCCGCCATCG CCTCGGCCGC CGCCGTCGAG CGGGTCAGCG TCGTCCAGGT CAACCCGCGG 
GGAGGCGCGT GA
 
Protein sequence
MDTKTAPAPA ASPRQGETPP VRLLGSGPRR WRWLVLALGM MTAGGLTGVV ALEQMDDRQG 
VLVADTDLPA GHVVTAEDLR VARISVADGV SFVGADRLEA TVGQTLTVPV TEGGLLPEAA 
LGTEAAFPER DRAVLGVALR VGRFPASIGP GAAVSVVVHP EEGATGGGVE AYRALVRDVQ 
PSAAEDGSVE LELVASSADA AAIASAAAVE RVSVVQVNPR GGA