Gene Ndas_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1218 
Symbol 
ID9245068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1519842 
End bp1520459 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content74% 
IMG OID 
Productregulatory protein DeoR 
Protein accessionYP_003679163 
Protein GI297560189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.658243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00388066 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGTGGTC TCAGCGGTGG CGCCACGGTT GTCAGGCAGG CAGCTGGAGC GAGCGCCACG 
ACGACACCGT CCGGAACGGG GCGGCTCTCG GTCGCCGAGG GCAGGATCGC CAGGGCCGCC 
CTGGAGGAAC TGCCGAAGGA CGGGGTGATC ATGCTCGACG CCGGGCCGAT GGCGGAGCGG 
ATCGCGTGGT TGCTGCCCGC CGGGTGCGGG CTGAGCGTCC TGACCAACTC GGTCCCGGCC 
GCGCTGGGGC TGGCCTCGCG CCGCGACCTC TCCGTGCACC TCCTGGGGGG CCGGGTGAGC 
GCGGCGGCCG GGACCACGCT GGCCTCCGTG CGCCTGCTGG AGCAGCTCCA CGTCGACGTG 
GCCTTCATCG TCGCCGACGG CGTGTCCCCC GGGCGGGGCC TGACCTGTGC CGATCCCGCG 
GAGGTGATGA CCAGGCAGGC CATGGTGCGG GCCTCGTCCA GGACCGTGCT GCTGGCCGAC 
CACACCAGGA TCGGCGGCGA CCGCATCTCC CGCTTCGCGC GCCTGCACGA GGTGGACTGC 
CTCATCACCG ACAGCGGCAC CGATCCCGAG GACGTCCGGA GGCTGCGCGG ACGCGGACCG 
CGCGTACGCG TGGTCTGA
 
Protein sequence
MSGLSGGATV VRQAAGASAT TTPSGTGRLS VAEGRIARAA LEELPKDGVI MLDAGPMAER 
IAWLLPAGCG LSVLTNSVPA ALGLASRRDL SVHLLGGRVS AAAGTTLASV RLLEQLHVDV 
AFIVADGVSP GRGLTCADPA EVMTRQAMVR ASSRTVLLAD HTRIGGDRIS RFARLHEVDC 
LITDSGTDPE DVRRLRGRGP RVRVV