Gene Ndas_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1215 
Symbol 
ID9245065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1492573 
End bp1496400 
Gene Length3828 bp 
Protein Length1275 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679160 
Protein GI297560186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0816157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.554588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTGG ACCACAACAT GTCCGACTCC ACACGCGGCG CGATCAAAGT CCTCACCAGC 
ATCGAGGTCC CCAAAGCCAG CCTGGCCACT CTGGGTCGCG GTTCGGAGGT CTACGCCGCC
CTCGAAAAAC GCGTCAAAGT CCTGGACGAC CTGTTCGACC TCAGCCGCGT CCACGCCCGA
CGCCACTTCA ACGGCAACAC CGCCCGCAAC TACGAACACT CCCTGGACCA GTTCACCACC
GGCGACAACG ACTACGTCGG CTCCGCCCGC TCCAACGCCG CCACCATGTC CAGCGAACTC
TTCAAGGCCC GCGCCAACGT CGAGTACATG CACATGATGG TCATCGGCCA GTTCGTCCAA
CTCCTGGCCG AGATCGCCTG GGCCATCGCC ACCGCCAAGT TCACCTTCGG CGCCTCCTTG
AAGTGGATCC CCATCTTCAA GGCCATCCGC AGCCTGGCCA TCCGCCGCAT CCTGACCTGG
CTGCTCATCA CCGTGCCCGG CCACCAGATC ATCAGCCAGA TCTTCGCCAG CATGGACAGC
ATCATCCAAC GCATCCAGAT CGGAAGAGGC ACCCGCCACC ACAAAGACCC CAACCTCACC
CGCAGCGCCC ACATCGGCGC CACCATCGAA GGCGCCCTGT CCGCCGTCTT CTCCGCGGGC
ATGGACGGAC TCTTCAGCAA ACAACTCACC GACCTGTTCA ACGACCGCGT CGCCCGCATC
ACCGACCTCC CCGACCCACC GCCCCTGGTC CGGACCGAGC CCACCCCCGG ACCCGGTGGA
CCCCCCACCG GACCGCCCAT CCGGGAGACC CCCGACGGGC CGCCCAGCGG ACCGCCCACC
GGGCCCCCGC CCGACCCCAG AGGGCCCGTC AAGGACACCC CGCCTCCCGG CAACCCCAAC
CGCGACACCG ACACGCCACC ACCGCCCGGC GGCGGGCCGG ACGGGCCGCC CTCCGGACCG
GTCAAGGACG ACCCGCCAGC GACGAACCCC GACCGGGGAC CGGACTCCCC CGCACCCAAG
GGCACACCGG GCGCGGACCT GCCCGCGCCC TCCCTCAACA AGGATCTCGC CGAGGTCTTC
GTCCGCCACA AGGACGAGTT CCTGGTCCCC TACAACCCCG CAAGCCCCAT CGGCGCGGGC
GTCTTCGACA ACGCCGCCAA AGCCGCCGCG GCGCGCAACG AGTTCGCCGA CCTGTTCGCC
CGCCACTTCG GCGACCACAT CGGAGACGCC GCAGCACGCG ACCTCGGACG CGACTACGCC
GACACCCTCG CCCGCAACTG GACCGACCCC AACCTGGGCC AGCACCTGCG CGACACCATC
GGCGACCGCC TACCCCCCAC CACCCGCGAC CACCTCTCCG ATGTACCGGT CACCCTCCAA
CAGCCCCTCA ACGACTACTT CTCCAAAACC AGCACCTACG CCCAGCAGAC CGGTGGCAGC
ATCGGCACCG GAGCCCTGGA GGGCTACCTC GGCGAGGGCC TGGGCAGCAT GGCCGACGGA
CGCGGCTGGG AGGCCTCCGT CTGGTCCGCC ACATCCGGTG CGACCCAGGC GGGCATCCAG
CAGGGCGCCA CCGACGGCAT CCTGCACGGC GCCGACCTGT TCAAGGACAA GGACAAACCC
GACCTCAACA CACCCCCGCC CCAGACCGAG AGCAGAGGTT CCGGCAACCG CACCGACGAC
CGCACCGGCC CCAGCGAAAC CGACCCCTGG TGGCGCGGGG ACGACGACCC CGGCCAGAAC
GGCGACCGAA CCCCCGAACG CAACAGCGGC AACTCCCCCG CACCCGGCGA CCGGAGCCAG
CCGACGGACG ACCGCGACGG CGAACCCGCC CCGCCCTCGC GGGACGACGA ACAATCCCTG
TACGACAGCG ACTCCGACAG CGACACATCC TCCGTCTTCG ACCGGGACGA GAACTCCTCG
CCCTACGACA GCGACGACGA GGCCTCACTG TTCGACACCG ACGAGGCCAC CCCCCAGCAG
GACACCACCA CCGAGAAACC GAACGGGAAA CCCGGACCCG ACACCCCCCA CATCCCGGGA
CCACGCGACG TCCCGCTGGG AACGAACTCC CCCGACCCCA GGACCGGCGA CGCCCCCTTC
CCGCAGGGCA TGAACAACGG CCCCCTGGCC GCCGACTTCC TCAACGCCAT CGTCCCCGAC
AACCCCATGG CGGCCGCACC CCCCGACGCC GAGCAGACCA CACCGAACAC GGGGAACACC
GACGACCGCG ACACCGCGGA CCCGACCGAC CGCTCCGCCC ACGGACCGGA ACAGCAGCAC
GGCACCGCTC CCGTCGCTGT GGCGCCCCCG GTCGGCCAGG CGGCTCCACC ACCCGCACCC
GCCCCGCAGA ACCCGGCCCC CGACACCGGC CAGCGCCCCG CGTCCTCCGA GCGCGGCGGC
GGACGTCCGT CCCAGGGCAC CGGTGACACC CGCGCCCAGG ACCCGTCCAC CCGACAGACG
ACCGGCAACG GCCCCCAGGT CGCCACGGAG AGCGCGCCTC CCGTTATGGA GACCGTGACC
ACCGGCGACA CCACCGGGCA GGACGACCAG GTCACCTCGA CGGACGAACA GCGCGCGAAC
CCCCACACCG CACCCGCCCC CGACGCCCCC TCTCCGGCCG ACGTCCCGCT GCCCCCTCCT
CTCGTCACCG AGAGCGGACC GCCCCAGGAC ACGGAGGACA CCGGGCACAC CCCCTCCGAA
AGCGACGGCG GACGGCCCGA CGATCGCGAG GAGGACACCT CCCGCGACGA CGACCGTTCC
CAGGACCGCG ACAAGGACCA GTCCGGCGAC AGCGGTGACC GGTCCGGCGA CGGCCAGCGG
TCGGGCGAGG AGAGCGGCGA CCGCTCCGGA GACGGTCGGG AAGGCTCGGG CGAGGGCCGG
GACCGGTCCG GGGACGAGAG GGGCGACGGA TCCGACGGCG AGAAGGACAG GGACGGCGAA
CGCGCGGACG ACGACGCCGA GTCCGTGCAC GAGGAGGAGT CCACCGACGC GGAGGACGGC
CAGGAGCGGG GCGACAGCGA CGGACGTTCG CCCCAGCGCA CCAACGACGA CAGCACACCG
GACTCCTCCC CCCAGCGGTC GATCGGCGAC GGCGCGCACA CCGCCGAGAG CACGTCACAA
CCGGATACCG CGCCCACGGC TGAGCAGCGG ACCACACCGG AGGACGTCCC GCCGTCCACA
CCGACCGTCG CCGAAACCGG CGACGGCCAG CGCGACACCG ACCTCAGCAC GGAGAACGCA
CCGCCTCCGC CGCCCGTCAC CGAGAGCGGT GGCGACCAGC ACGACACCGG TCCCACGTCG
GAGAACGGAC CCCCTCAGGA CACGGAGGAC ACCGAGCACC CCCGTGCCGA ACGCGACGCG
GAACAGTCCG GCGAGCGCGA CGAGGACAGC GGGGCGCCGG TAGCGGGCTC TGGGGACGCC
GCGCGCGCCG CCGAGACCAC GACGTCCGAC ACGGCCGAGG ACACGCCGGC CCCCGCCCGG
AGCACGGACA CGGACGCGCC TGCGGCACCG CCCGCCGCCG GACCCGAGCG CGCGGCGGAC
AGCGGCTCCC CACCCCCGCA CAGACGCGCA CCGACCCCAC CGTCTCCGGG ATCGACCCGA
GGGCCGACGC CCGCGCCGCG TCGGTCCTGG ACCGCCTGCC CGAACTCACC CGGGCCCTCG
CGGACAAGGA CATCCCCAGG GCGCGGGCGC TGGGCGCCGA ATTCTGGAGA TCACTGCGAC
CGGTCGACGG TCCGGCCCCG GAGAACCGCT CCATCCGCGA GGCGCACACC CTCGCGCAGG
CACTGGTGTA CGTCCTCTCC GACCCCTCCG ACAGGCGCGT CCCGCTGA
 
Protein sequence
MPLDHNMSDS TRGAIKVLTS IEVPKASLAT LGRGSEVYAA LEKRVKVLDD LFDLSRVHAR 
RHFNGNTARN YEHSLDQFTT GDNDYVGSAR SNAATMSSEL FKARANVEYM HMMVIGQFVQ
LLAEIAWAIA TAKFTFGASL KWIPIFKAIR SLAIRRILTW LLITVPGHQI ISQIFASMDS
IIQRIQIGRG TRHHKDPNLT RSAHIGATIE GALSAVFSAG MDGLFSKQLT DLFNDRVARI
TDLPDPPPLV RTEPTPGPGG PPTGPPIRET PDGPPSGPPT GPPPDPRGPV KDTPPPGNPN
RDTDTPPPPG GGPDGPPSGP VKDDPPATNP DRGPDSPAPK GTPGADLPAP SLNKDLAEVF
VRHKDEFLVP YNPASPIGAG VFDNAAKAAA ARNEFADLFA RHFGDHIGDA AARDLGRDYA
DTLARNWTDP NLGQHLRDTI GDRLPPTTRD HLSDVPVTLQ QPLNDYFSKT STYAQQTGGS
IGTGALEGYL GEGLGSMADG RGWEASVWSA TSGATQAGIQ QGATDGILHG ADLFKDKDKP
DLNTPPPQTE SRGSGNRTDD RTGPSETDPW WRGDDDPGQN GDRTPERNSG NSPAPGDRSQ
PTDDRDGEPA PPSRDDEQSL YDSDSDSDTS SVFDRDENSS PYDSDDEASL FDTDEATPQQ
DTTTEKPNGK PGPDTPHIPG PRDVPLGTNS PDPRTGDAPF PQGMNNGPLA ADFLNAIVPD
NPMAAAPPDA EQTTPNTGNT DDRDTADPTD RSAHGPEQQH GTAPVAVAPP VGQAAPPPAP
APQNPAPDTG QRPASSERGG GRPSQGTGDT RAQDPSTRQT TGNGPQVATE SAPPVMETVT
TGDTTGQDDQ VTSTDEQRAN PHTAPAPDAP SPADVPLPPP LVTESGPPQD TEDTGHTPSE
SDGGRPDDRE EDTSRDDDRS QDRDKDQSGD SGDRSGDGQR SGEESGDRSG DGREGSGEGR
DRSGDERGDG SDGEKDRDGE RADDDAESVH EEESTDAEDG QERGDSDGRS PQRTNDDSTP
DSSPQRSIGD GAHTAESTSQ PDTAPTAEQR TTPEDVPPST PTVAETGDGQ RDTDLSTENA
PPPPPVTESG GDQHDTGPTS ENGPPQDTED TEHPRAERDA EQSGERDEDS GAPVAGSGDA
ARAAETTTSD TAEDTPAPAR STDTDAPAAP PAAGPERAAD SGSPPPHRRA PTPPSPGSTR
GPTPAPRRSW TACPNSPGPS RTRTSPGRGR WAPNSGDHCD RSTVRPRRTA PSARRTPSRR
HWCTSSPTPP TGASR