Gene Ndas_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1213 
Symbol 
ID9245063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1478298 
End bp1483841 
Gene Length5544 bp 
Protein Length1847 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679158 
Protein GI297560184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.561401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCT CCCTGACACG CGACATGGAC CCGCGGACCC GGGACGCCTT CAACGACGCC 
GTGACCCTGC TCGAATCCGT CGAGAACAAG GGCAAGGACA TCCTCGACCT CGGCCGGATC
GTCCTGGCGA AGTCGTTGGG CTGGAACCCG CCCGCGAACG CGGTCGCCGA CGGGCATTAC
ACCCCGCAGG CCGTCGAGAA GGCGGCCGAC TACGCGGCGG ACAAGCTCAA GCTGAACTCC
CGCAACAACG CCATCGACCA CGCGCTCACC GAGCTCGGCA TCAAGGCCTC CTTCGCCGAG
GCCAGTTCGG AGAAGGGCGC CGAACTGCCC GAGCTGGGTC CGACCACGTG GATGATGCGC
GCCATACCCC ACCCGGAGAC GGCGCTCATC AAGGACTACA ACCCGAGCGT GCGCCTGACC
GACTCCTCGG AGACGAGCAG GACCTTCTCC CCGTTCCACA ACGAGTCGTC CACGACGACC
ATGGGTTTCG AGGCGCGCCC CTCGGGACGC ACCGGGACGG GCCCTCCGAC GACGGCCACC
CACTACGGTT CGGCCAGCAA CACGGGATCG TCCACGTCCG GAGGCGACAC CGCGCGGGGG
AGCAGGCCGA AGGAGCCTCC CCACTCCGAC CGTGTCCGTA CCGGACCCGG CTACCTGGTG
GAGATGGACA CCGACGTGTT CATCGGGGCC AGGACCGAGC TGAGCGGCCC CTGGTACAAG
CGCTCGGCGC GCTACGTCGG GGACAAGGCC GCGTCCGCGG GCCGGGCGGT GCGCGGCGCC
TTCGGCGGCC GGCGCACCCC CTCGCCCGTC CCGACCCGCC CCGCCCGGTG GCAGCAGGGC
CGGACCACCG TCAAGACGAC CCGGTGGATC TCCCACGGCG ACGCGGTGCG GATGGGTGTC
ATCACGCCCG ACCACGCCAC CCGGATCGCC CCCCTGACCG AGCGTTTCGC CCGGATCCAG
AAGGCGCTCG GAAACGCGGA GAAGGCCTAC CTGGAAGCGC GCTGGCCCCT GGACCAGGCG
GCCTCCGACC GCGTCGCCGC ACCCGACGAC CCGCGGGTCC GGCAGCGTTA CGAGGACCTG
GAGGGCGCCT ACGAGGACCG GCGGCAGGAA TTCGAGGGGG CTGTGCGCGA CTGGGTGACG
GCGCTCCAGG AGCTGCGCGA CGGTCTGGGC GACCCCTCGT CCCTGCCCAG GCCGCGCACC
GCGACCGCAC CGGACCTCGA CACCATCCAG GAGGAGCCGC CTCCTCCCCC GGCCCCGCAG
CGGAACGCCG ATGACCCCGC CGCCGATCCG GAGGCCATCG AGCTGCCCGA ACGGAACAAC
CGCCAGCCCG GGCAGGAGGG ACGGCGGCCC GAGCGGGGCG ACACCGCACC CAACCTCCTG
GACACCCTCG GCTCGGACCT CAGCATCCGG CCTCGGGAGG CCGTGCCGGG GGAAGCGCCT
CCCCAGACCC AGCAGCGGAA CACCCCGGAC CCCGCGACCA CCGAGTCGCC CGAGCGCGAC
GACCGGCCGC AGGAGGACGT GCCGAGGAGA GTACCCGAGC CGAGCCCGGC CGAGGTGCTC
GAACGGGCGC GGCAGAGACT GGCGCGGGAC ATGGTGATGG GCAGGGCCCT CCAAGGCCAG
GAGGGCTCCT CCCGGAACGG GACCGCCCCC ACCGACAACC GCCCGGAACG CCACTCACGC
AACCAGACGA AGGGGCCCCT CAGCCACACG GACCAGCGTT CGGGCCCGTC CTCCGAAACC
CACGCCCGGC CCGGGTCCGC GACGGTCCGG AGGCCGAGGA CGTGGACGAC GCCGACCGGG
GAGGACGGGA ACGGGCCGTC CCAGCACGAT GCGGCCCTAT CCGGCGACCA GGCCGGAACC
GGTCGCGGCC CCGCCCCGGA GCGCGTCGAC GACCCCGCCG ACGGGTACAC GGCGAACGAC
GAGGAGAACC TGTACGACGC CACCGACCAG GAGTCCAGCG ACGAGGAGGA GGCGCCGCGC
GTCCGCTGGC TCGACAGGCA CTACCCGGAG GCGGCCTCGC TCAGCGAGGA GGAACGCGCA
GAGCTGATGC GGTCGCTCAT GGAACGGTCC ATGGCGGTGG GCCCGCCCGT CCCCGAAGGG
TTCCGGTACG ACATGGACCT GGGCGGGCCC GTCGACGCCG CCTGGCTCGA AACCCAGGGA
GCACAGGGCT TCCCCTGGGA GTCCGACACC ACCGCCCTGC CCGGGCCCTC CACGACCCCG
AGTGCACCGC AGCAGCAGGA CCGCCCCCTC GACGACCAGG ACCAGCGGCC GCAGCCGGCA
CCGTCCGAGG ACGACGCGCT GGCCCGGGCC GCCGAGGACG CGGTGTCCAC CTTCGACGGA
CAGCGCCTCC CCCTCCACAC GCGGACCGGG ACCGATCACG ACACCCTCCC CCAGCCGGAC
CAGGACACCC TCTCCGAGGC GTCCTCAGTG GACTCGGAAA CGCTCAGGGA CATGCGGCTC
CGACTGGAGC GGCTGATGTC GTCGGACCCG GCCCCCTCCG AGGGCGACCG GCCGGCCCCC
GAGGACACCG GTCTGACGGG CGACCACGGC CCACAGCCCT CCCCCGCGCA GACGGAGCCG
CAGGGGCTGG AGGACTGGCT CCGTACACGT AGGGACCAGG ACGGACAGCA GCCGCTGTCC
GCCGAGGCGC CGCAGAGCGT GATACACGTC AGCCAGCTGA ACCGTCACCC CGAGGCGGCC
TCCACCGACC CCGGAGACGA ACGCGCTCCC CAGCCGCCGG AGATCGACCC CGCACCGGAG
GAACAGCGCT CCCCCGACCG AACTGGGACG AACCCCGCTT CCGAGGACCG GCCCGCCCTC
CGCCGTCCGC AGCCCCGTGT CCTGCGCGTC CCCTCCGCGA ACCCGGACCG GAACGAGTGG
AACAACCGGC TCCAGGCCAT CCAGGACTGG CGGACCAACT GGGAGCACGA GGCGCGGACA
CCGGAGGAGA GGCAGCGTCT ACGAGAGGAC TGGAGGGCCA AGTGGTCGCT ACCGGCGACG
ACCCGGCCAA GCGAGAACGG AACCTCCCAG GACGACGCCG GCCCGACGAA CGGCCACGGT
CCCCAGCGCT CCCCTGGCCA GACCGAGGCG GATCGCGCCC CTGGGAACCG GCCCGTCCCG
CAGACGGAGA CCGCCCCGGC AGGGGAGGGG CCGCGCTCCT CCACCCCGGC CATGGCGAAC
CCGGACCCCG ACAGCCCGCA GCAGAACCGC ACGACCACGC AACCGACCCA ACCGCCCCCT
GAAGAGGCCT CCAGCACCCG GTCCCAGCCG TCCCCCGAGG AGACCTCCAG TACCCAGCCC
CGACCGGCGC CCGAACAGGC CCCCGTCCCC CAGCCCCTCA CCCGGAACCG GGACGACGAG
GGTTCCTCCA CCCTGCCCCA GGAGCGCACG GACACCTCCC GGCAGGAGGG GAGCGTGCCC
TCGGCGGAAC AGACTCCCCC GGCCGCCGAC CCGGCGTCCG ACCTGTTCGC GTTCTTCGAG
CAGGAGCTGA ACGGTCCCGC GAACACCGGA GGCGGCGTCC CCGCGCAGGA CACCGCGCAC
GCACCCTCCG GCGGGGGGAC GACGACCCGG CCCGCCCCGG CCGTCAACGA CGGCCGGGCC
CAGGAGACCT CGGCCCCCGG GACAGCGCCC GAGGCGACCG GGTCCGACCC GTCCCGGAGA
CAGCACGAGC CCGAGGACGG GGAAACGGCG AAGGAGCCCG AGCACACACA GGACGAGGAG
AAGAAGGAGG AGGACACCGA GGAGGAGAAC GAAGACGCCC CCACCGACTC CAAGGACCAG
CGCAAGGACG AAGGCGGCGA CGACGGCGGC CCCGACAAGG GCGGTTCCGG GGGGAACAGC
GGGGACCGGA CCGGCGGCAA CGGAGGCTCC GGCCAGGACC GCTCCGGAGG CGAAGGCGAC
CAGGGCGGCA GCGGTGGCAG CGGTGGCAGC GGCAGGACCG GTGAGGGTGA CCGTTCGGGC
GACCGTTCCG GGAACCGGGA CGGTTCCGGG GGGAAGGACC TCGGGAAGCA GGGGGAGGAC
CGCTCCCCGC GTGGAGCCCA CCAGGGCGGC ACGAACCGCG GCCGCGGCGA GAGCCCGGCC
CGCCCCGGCA CCGACGCGGA CCCTGTTCCG GACCTGGTCC CGGACACGGA CTCGGACGGC
TACGACAGCG ACGACGACCT GTCCCTGTAC GACCTCCCCG ACACACTGGT ACAGCGGCCC
CGCGGCTCAA CGTTCGACGA ACCGCTGGTC CGACCGCCGT CGGACCAGGA CGGCTCCCCC
TCCGACTCCG TGGACCCGAA GTCCTCGGAC AAGGAGAACG GCTCGCCCGA CACCCTCGGC
TCCAAGCCCT TCCCCGACGA CTTCCTGGGG CTGCTCAACC CCAAGGCCGA CTTCGACCAG
CCGCTGCCCG GTTCGGTGAC CGACATCCTG GCCTTCCCCG TGATGGGCGA CAACGGTGGG
CCGTCGAACC GTCAGCCCGG ACAGGACGAC AGCGGTCAGG ACGACTCGCG GACCGGGGCG
GAGGGCAGCG GCCAGGAGAA GTCGGACCAG TGGAAACCCG CCACCGAAGT CTTCGGCATC
CAGGGCGAGG AAACCGAAGG GGACCCCGCT TTCCCCAAGT ACCTCACCGA CGGGAGAATC
CTCGGAAGAA TTCCCGAAGC CGACAGGACC ACCGACCAGG ACGGACTCAT CACCCACGTC
AAGGACAAAC CCCTCGACGA ACTCGTCCAC GAACTCGTCA ACATGCGGGC GAGGGAAATA
TCCTACCTCG TCAAAAACAA GGTGCCCGTC CGCGTCGAAT GGCACGACCT CGGCAGGATG
GACAAGAGCC TGCCCAAGAA ATCGAGGCCG AACCTCGACC CGGAGACCGG GAGGAACACG
GACGGCTACC CCCATGAGGA AGACGGGGAG GAGTACTTCG TCAAGATCCC CCTCACCCCC
GAGGACCTGG GCCACGAGAA CGGAGCCGTC AACTCCGTCG TCGTCGACCG CAGGACCGGA
CTCGTCGCCG AAGGCCTCAA CGGCAGGCCC CGCCACTCCG TCATCGCGCC CGAACTCCTG
CACCCCGAGA TCAAGAACCG CATCGACGGC ATGTTCCTCC GGGGCAAGTA CGAGATCCTC
CAGAAGGACG GCACCACCCG CAGGATCAGC AACTACCCCC ACTACGACAA ACCCGCCAGG
CATGCCGAGG TCAAGGCTGT CAACCGTCTC CTGAACGCCA CGGAAGACGC ACAGATCAGC
CACTTCCAGC TCGACAACAA GTTCACACTG AAGCCGCCGT GGGTCCCCTA CTGCCCCTCC
TGCGCGAACT GCGCCCGCAT CACCGAGGGA GCAGCCGCCC CGCGCAGCGG GAAGAACACG
CACACCACGG ACGACATCAG GAACATCACG TACTACACCC CGAGAAGGGC CGACGCGGAA
ATCGACCCGG ACAGAGGCAT CGAACATGGA TTCCCGACAT ACGACACCCC CTTCGGCGGG
CCACACGACC CCGACGACAG AAAGAGAAAA CCGGGCGAGG ACGACGGACT TCACCGGGAG
GGAGACGACA AGAGACAGCG GTAA
 
Protein sequence
MARSLTRDMD PRTRDAFNDA VTLLESVENK GKDILDLGRI VLAKSLGWNP PANAVADGHY 
TPQAVEKAAD YAADKLKLNS RNNAIDHALT ELGIKASFAE ASSEKGAELP ELGPTTWMMR
AIPHPETALI KDYNPSVRLT DSSETSRTFS PFHNESSTTT MGFEARPSGR TGTGPPTTAT
HYGSASNTGS STSGGDTARG SRPKEPPHSD RVRTGPGYLV EMDTDVFIGA RTELSGPWYK
RSARYVGDKA ASAGRAVRGA FGGRRTPSPV PTRPARWQQG RTTVKTTRWI SHGDAVRMGV
ITPDHATRIA PLTERFARIQ KALGNAEKAY LEARWPLDQA ASDRVAAPDD PRVRQRYEDL
EGAYEDRRQE FEGAVRDWVT ALQELRDGLG DPSSLPRPRT ATAPDLDTIQ EEPPPPPAPQ
RNADDPAADP EAIELPERNN RQPGQEGRRP ERGDTAPNLL DTLGSDLSIR PREAVPGEAP
PQTQQRNTPD PATTESPERD DRPQEDVPRR VPEPSPAEVL ERARQRLARD MVMGRALQGQ
EGSSRNGTAP TDNRPERHSR NQTKGPLSHT DQRSGPSSET HARPGSATVR RPRTWTTPTG
EDGNGPSQHD AALSGDQAGT GRGPAPERVD DPADGYTAND EENLYDATDQ ESSDEEEAPR
VRWLDRHYPE AASLSEEERA ELMRSLMERS MAVGPPVPEG FRYDMDLGGP VDAAWLETQG
AQGFPWESDT TALPGPSTTP SAPQQQDRPL DDQDQRPQPA PSEDDALARA AEDAVSTFDG
QRLPLHTRTG TDHDTLPQPD QDTLSEASSV DSETLRDMRL RLERLMSSDP APSEGDRPAP
EDTGLTGDHG PQPSPAQTEP QGLEDWLRTR RDQDGQQPLS AEAPQSVIHV SQLNRHPEAA
STDPGDERAP QPPEIDPAPE EQRSPDRTGT NPASEDRPAL RRPQPRVLRV PSANPDRNEW
NNRLQAIQDW RTNWEHEART PEERQRLRED WRAKWSLPAT TRPSENGTSQ DDAGPTNGHG
PQRSPGQTEA DRAPGNRPVP QTETAPAGEG PRSSTPAMAN PDPDSPQQNR TTTQPTQPPP
EEASSTRSQP SPEETSSTQP RPAPEQAPVP QPLTRNRDDE GSSTLPQERT DTSRQEGSVP
SAEQTPPAAD PASDLFAFFE QELNGPANTG GGVPAQDTAH APSGGGTTTR PAPAVNDGRA
QETSAPGTAP EATGSDPSRR QHEPEDGETA KEPEHTQDEE KKEEDTEEEN EDAPTDSKDQ
RKDEGGDDGG PDKGGSGGNS GDRTGGNGGS GQDRSGGEGD QGGSGGSGGS GRTGEGDRSG
DRSGNRDGSG GKDLGKQGED RSPRGAHQGG TNRGRGESPA RPGTDADPVP DLVPDTDSDG
YDSDDDLSLY DLPDTLVQRP RGSTFDEPLV RPPSDQDGSP SDSVDPKSSD KENGSPDTLG
SKPFPDDFLG LLNPKADFDQ PLPGSVTDIL AFPVMGDNGG PSNRQPGQDD SGQDDSRTGA
EGSGQEKSDQ WKPATEVFGI QGEETEGDPA FPKYLTDGRI LGRIPEADRT TDQDGLITHV
KDKPLDELVH ELVNMRAREI SYLVKNKVPV RVEWHDLGRM DKSLPKKSRP NLDPETGRNT
DGYPHEEDGE EYFVKIPLTP EDLGHENGAV NSVVVDRRTG LVAEGLNGRP RHSVIAPELL
HPEIKNRIDG MFLRGKYEIL QKDGTTRRIS NYPHYDKPAR HAEVKAVNRL LNATEDAQIS
HFQLDNKFTL KPPWVPYCPS CANCARITEG AAAPRSGKNT HTTDDIRNIT YYTPRRADAE
IDPDRGIEHG FPTYDTPFGG PHDPDDRKRK PGEDDGLHRE GDDKRQR