Gene Ndas_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1209 
Symbol 
ID9245059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1470120 
End bp1471538 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content74% 
IMG OID 
Productsecretion protein snm4 
Protein accessionYP_003679154 
Protein GI297560180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCC CCCACCGGAT GAACGATGTC GCCTCCCCGG ACCTGTGCCG ACTGCTGATC 
CGCGCCCCCG GGCGCTCCTT CGAGATCGCA GCGCCCACCG AGGTCCCCCT CTCCGAGATC 
CTGCCCACCC TGGTGCTCTA CGCCGAGGGT GACAACGGCG AGGACCTGGA CGAGAGCGGG 
CTGGAGCACG ACGGCTGGGT CCTCCAGCAA CTGGGCGACG AGCCCCTGGA GGAGGACGAG 
ACCCTCCGCT CCCTCGGACT CTGCCACGGA GAGACCCTCT ACCTGCGCCC CCGCCGCGAC 
CAGCTGCCGC CGGTGCACTT CGACGACCTC ACCGACGGCG TCGCCACCGG CATGGGCGAG 
CGCGCCGACC GGTGGCGCCC CGAGGCCACC CGCGTCCTGC TCCAGGCGCT GGGGCTGGTC 
GTGCTCTTCA CCGGTCTGGC GGTCCTGGTC AGCGGCGGCC CCGGCCTGCT GACCGCGGTG 
TCCGCCGCCT GCTCCTCCCT CCTCATGCTG CTGTCGGCCT GGGCGGCCTC GCGCGCCATG 
GGCGACCTGG CCGCCGCCAC CGGCCTGGCC GCGGCGGCCA CCCTGTACAT GGCGGTGGCC 
GGAGCCTCCG TGCCCTCGGG CGACCCCGGC ACCGCGCTGA CCGGAGCGAG GGTCCTGACC 
GGCGCGGTGA CCGCCGCCGG GGCCAGCGTG CTCGGCCTGG CGGCCGTGGC GGGCTCGGTG 
CCCTTCTTCG CGGGCCTGTT CACCGCCGAG GTGCTGTGCG CGCTGGGCGC GCTGTCCCTG 
ATGTTCATCC CCGGCGCCAC GGTCCCGGCC GTGGCGGCGC TGACGGCGCT CATCGCGTTG 
CTGCTGGGCA CGTTCGCCCC CCAGCTGGCC TTCCGCCTCT CCGGCCTCAA ACTGCCGCCC 
CTGCCCTCCA ACCCCGACCA GCTCCAGGAG GGCATCGACC CCTACCCCGC GCGCGGGGTC 
CTGGACCGCA CCGCGCTGGC CGACCGGTTC CAGACCGCCC TGTACGCCTC CACCGGCGCC 
GTCCTGACGG TCTGCCTGGT CGTGCTCGCC GCCTCCCCCG GGTGGGTGCC GATCACGCTG 
TGCGTCATCG TGTCGCTGGT GCTGCTGCTC CAGTCGCGCG GCCTGGCCAG CGCATGGCAG 
CGGTCCTTCG TGGTCGCGCC GCCCTGGATC GGGCTGACCG CGCTGGTCCT GGTCCTGGTG 
TGGACGGCCG ACCCCCTGCC CCGCACCCTC GCCATGGTGG GCCTGTTCGC CGCCTCCGCG 
ATCCTGGCGG TGGTGTCGTG GAACCTGCCG GGCACGCGGC CGCTGCCCCA CTGGGGCCGG 
GCCGCCGAGA TCATCCAGTC GCTGCTGACG GTGGCCATCG TGCCCCTGGT CCTGGCGATC 
TTCGGCGTGT TCTCGCTCCT GCGCGGAATC GGCGGCTGA
 
Protein sequence
MMGPHRMNDV ASPDLCRLLI RAPGRSFEIA APTEVPLSEI LPTLVLYAEG DNGEDLDESG 
LEHDGWVLQQ LGDEPLEEDE TLRSLGLCHG ETLYLRPRRD QLPPVHFDDL TDGVATGMGE 
RADRWRPEAT RVLLQALGLV VLFTGLAVLV SGGPGLLTAV SAACSSLLML LSAWAASRAM 
GDLAAATGLA AAATLYMAVA GASVPSGDPG TALTGARVLT GAVTAAGASV LGLAAVAGSV 
PFFAGLFTAE VLCALGALSL MFIPGATVPA VAALTALIAL LLGTFAPQLA FRLSGLKLPP 
LPSNPDQLQE GIDPYPARGV LDRTALADRF QTALYASTGA VLTVCLVVLA ASPGWVPITL 
CVIVSLVLLL QSRGLASAWQ RSFVVAPPWI GLTALVLVLV WTADPLPRTL AMVGLFAASA 
ILAVVSWNLP GTRPLPHWGR AAEIIQSLLT VAIVPLVLAI FGVFSLLRGI GG