Gene Ndas_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1194 
Symbol 
ID9245045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1450767 
End bp1451636 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content78% 
IMG OID 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003679141 
Protein GI297560167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.355955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.558818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GGACTGACGC CGCCGCGCAC GCGGACGCGC TCACGTCGGC CGTCACCTGG 
CTGTTCGTGC CCGCGTCCCG TCCCGACCGG TTCGCCAAGG CGGTGCGCAG CGGCGCCGAC
GCCGTCATCA TCGACCTGGA GGACGCCGTC CCGGCCGACG GCAAGGACGC CGCGCGCGAA
GCGCTGCGGG CCGGGTGGCC GAGCGTCGTC GATTCCCGTC CCCTCTCCGG CGGCGCGCCC
GCCGTGGCCG TGCGCGTCAA CGCGCGCACC ACCGCGGAGT TCGCCGCCGA CGCGCGGCTG
TGCCGCGAGC TGGGGCCGGA CGCCGTCGTC CTGCCCAAGG CCGAGTCCGG CGACGACGTG
CGGGCCGCGG CCGAGGCGAG CGGGGCGCCG GTACTGCCGC TGATCGAGTC CGCCCGCGGT
CTGGTGGGGC TCTCACGGAT CGCGAGCCGT CCCGAGACGG TCCGGCTGCT GTTCGGCGGG
ATCGACCTGG CCCTGGACCT GGGCACCGCC GACGACGCCG CGCTCGACCC GTCGCGGAGC
GACCTGGTGC GCTGGTCGGC GGCGTGCTCG CTGCCGCCGC CGGTCGAGGG CGTCACCACG
GACGTGCGCG ACGGCACGGC CGCGGCACGG GACGCCGCCC GCGCCCGCCG CTGGGGGTTC
GGCGGCAAGC TGTGCGTGCA CCCCGCCCAG GTCGCGCCCG TGGACGCCGC CTTCGCCCCC
GACGCCGCCG AGCTGGAATG GGCGCGCGGG GTACTCGCCG CGGGAGACGG GGGCGCTGTT
CAGCGCGGTG GTGAGATGAT CGACCGACCG GTCGTGGAAC GCGCCCGCCG ACTGCTGCGG
CGCGCCGAGG GGAGGGACCG GACCGTGTAG
 
Protein sequence
MAPRTDAAAH ADALTSAVTW LFVPASRPDR FAKAVRSGAD AVIIDLEDAV PADGKDAARE 
ALRAGWPSVV DSRPLSGGAP AVAVRVNART TAEFAADARL CRELGPDAVV LPKAESGDDV
RAAAEASGAP VLPLIESARG LVGLSRIASR PETVRLLFGG IDLALDLGTA DDAALDPSRS
DLVRWSAACS LPPPVEGVTT DVRDGTAAAR DAARARRWGF GGKLCVHPAQ VAPVDAAFAP
DAAELEWARG VLAAGDGGAV QRGGEMIDRP VVERARRLLR RAEGRDRTV