Gene Ndas_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1183 
Symbol 
ID9245033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1438445 
End bp1439659 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content73% 
IMG OID 
ProductAcyl-CoA dehydrogenase type 2 domain protein 
Protein accessionYP_003679130 
Protein GI297560156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.576313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CCCTGGCCAC GGGCACGGCC CCCACCGCCA CCGCCGACAC AACCGTTCCC 
AACAGCTTCG AGGAGATCCA CGCCGCGGTC GTGGCCCTCC AGCCCCTGTT CAGGGAGCAC
TCCGCCCGCA TCGAGGAGCA CCGCAGGCTT CCCGCCGACG TCGTGGAGCT GCTGCGCGGC
GCCGGCGTCT TCCGCGCCGC GGCGCCCGCC TCCTGGGGCG GCCCCGGCCT GACCTCGGTC
GAGCAGGCCC GCGTGGTCGA GGCCGCGGCC TACGGGGACG TCTCCGTGGG CTGGTGCGCC
ATGATCGGCA TGGACTCGGG CATCTACTCG GGCTTCATCG ACCAGGACAC GGCCCGGCGG
GTCTACCCGT CCCTGGACCT GGCCCAGTCC GGCTGGATCT TCCCGCAGGG CAACGCGCGC
CGGGTCGAGG GCGGCTACCT CGTCTCGGGC CGGTGGCGGT TCGGCTCGGG GATCACCCAC
TGCGACGTGC TCGCCGCCGG GTGCACCGTG CGCGACGACG AGGGCGAGCC CGTCATCGAC
CCCCGCACCG GCAAGCCCGA GTGGCGGATC GCGCTGGCCT CGCCCGACGA GTACGAGATC
GTCGACACCT GGCACACCAC GGGCCTGGCC GGCTCGGGGT CGCTGGACTA CACGGTCGAG
GAGCTGTTCG TGCCCGAGGA ACGCACCTTC GCCTTCAACC GTCCGGTGCG CACCGGACCG
CTGCACGACG CCCCCGACGC GATCCTGCGC AAGATGTCCG GCGTACCACT GGGCCTGGCC
CGTGCCGCCC TGGACCACGT GCGCGGCCTG GCGCCGGGCC GCGTCGACCG CGAGACCGGC
CTCCCCTGGC CCGCGGACCA CCGCGTGCAG CAGGCCGTGG CCCAGATGGA GATGGAGCTG
ACCGCCGCCC GCGCGTCCGT GTACTCCACC CTGGAACGCC AGTGGGAGGC CCTGGAGCTG
GGAAGCGAGC GCGACGTCGA CGCCCGCGCG GAGACCGCGC TGGCCCGATA CCACGCCTTC
CGCACGGCGC GCTCGATCGT GCACCGGCTG TTCGACCTGG TGGGCGGCGC GTCGGTCTAC
CGCGACCGGT CCCCGATGGA CCGCTGGCTG CGCGACGCCA ACACCATGTG CCAGCACGCC
GTGGCCCAGG ACTCCATCCT CCAGCTCACC GGGAACATCC TGCTGGGCGG CGAGTCGACC
TCGCCCTTCC TGTGA
 
Protein sequence
MSTSLATGTA PTATADTTVP NSFEEIHAAV VALQPLFREH SARIEEHRRL PADVVELLRG 
AGVFRAAAPA SWGGPGLTSV EQARVVEAAA YGDVSVGWCA MIGMDSGIYS GFIDQDTARR
VYPSLDLAQS GWIFPQGNAR RVEGGYLVSG RWRFGSGITH CDVLAAGCTV RDDEGEPVID
PRTGKPEWRI ALASPDEYEI VDTWHTTGLA GSGSLDYTVE ELFVPEERTF AFNRPVRTGP
LHDAPDAILR KMSGVPLGLA RAALDHVRGL APGRVDRETG LPWPADHRVQ QAVAQMEMEL
TAARASVYST LERQWEALEL GSERDVDARA ETALARYHAF RTARSIVHRL FDLVGGASVY
RDRSPMDRWL RDANTMCQHA VAQDSILQLT GNILLGGEST SPFL