Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1180 |
Symbol | |
ID | 9245030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1436087 |
End bp | 1436839 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003679127 |
Protein GI | 297560153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.219783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TCCTCGATGG CAGGCGGGCA CTGGTGACCG GCGGAGGCCG CGGGATCGGG GCGGCCATCG CCCTGCGTCT GGCCCGCGAC GGGGCGGCGG TGGCGATCAG CTACCACTCC GACGCCGAGT CGGCCGCGGC CACCGCCGCG GCCATCGCCG AGCGGACCGG CGGCAAGGCG GTGATCGTGC AGGCCGACAC GGGCGACGCC CGGGACGCGG AGCGGGTCGT GGACGAGGCC GCCGAACTGC TGGGCGGCCT GGACATCCTG GTCAACAACG CGGGGATACT GGACCCCTCC TCCGCCGTGA TCGACGACCT GGACCCGGCG GTCGCCGGTC GCGTGCTCGA CGTCAACGTG CGCGGCCCCC TGCTGGCCTC CCGCGCGGCG GCGCGCCACC TGGGCGAGGG CGGCCGGATC GTCAACCTCG GCTCCTGTGT GGGCGAGCGC GTCCCGGGCG CCGGATACAC GGTCTACGCC ACCTCCAAGG CCGCGATCAC CGGTATGACC AAGGCGCTGG CCCGTGACCT CGGGCCGCGC GGGATCACGG TGAACGAGGT GGCCCCGGGC GCCACCGACA CCGACATGAA CCCGCAGGAC GGACCCAACT CCGCGCCCCA GAAGGAGGCG TCGCCGCTGG GCAGGTTCGC GACGCCGGAG GAGGTCGCCG ATGCGGTCGC CTACCTGGTC TCCCCGTCTG CGGGGTTCAC CACGGGCGCC CGGCTGGGTG TGGACGGTGG TCGCAACGCC TGA
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Protein sequence | MSGVLDGRRA LVTGGGRGIG AAIALRLARD GAAVAISYHS DAESAAATAA AIAERTGGKA VIVQADTGDA RDAERVVDEA AELLGGLDIL VNNAGILDPS SAVIDDLDPA VAGRVLDVNV RGPLLASRAA ARHLGEGGRI VNLGSCVGER VPGAGYTVYA TSKAAITGMT KALARDLGPR GITVNEVAPG ATDTDMNPQD GPNSAPQKEA SPLGRFATPE EVADAVAYLV SPSAGFTTGA RLGVDGGRNA
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