Gene Ndas_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1180 
Symbol 
ID9245030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1436087 
End bp1436839 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content75% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679127 
Protein GI297560153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.219783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG TCCTCGATGG CAGGCGGGCA CTGGTGACCG GCGGAGGCCG CGGGATCGGG 
GCGGCCATCG CCCTGCGTCT GGCCCGCGAC GGGGCGGCGG TGGCGATCAG CTACCACTCC
GACGCCGAGT CGGCCGCGGC CACCGCCGCG GCCATCGCCG AGCGGACCGG CGGCAAGGCG
GTGATCGTGC AGGCCGACAC GGGCGACGCC CGGGACGCGG AGCGGGTCGT GGACGAGGCC
GCCGAACTGC TGGGCGGCCT GGACATCCTG GTCAACAACG CGGGGATACT GGACCCCTCC
TCCGCCGTGA TCGACGACCT GGACCCGGCG GTCGCCGGTC GCGTGCTCGA CGTCAACGTG
CGCGGCCCCC TGCTGGCCTC CCGCGCGGCG GCGCGCCACC TGGGCGAGGG CGGCCGGATC
GTCAACCTCG GCTCCTGTGT GGGCGAGCGC GTCCCGGGCG CCGGATACAC GGTCTACGCC
ACCTCCAAGG CCGCGATCAC CGGTATGACC AAGGCGCTGG CCCGTGACCT CGGGCCGCGC
GGGATCACGG TGAACGAGGT GGCCCCGGGC GCCACCGACA CCGACATGAA CCCGCAGGAC
GGACCCAACT CCGCGCCCCA GAAGGAGGCG TCGCCGCTGG GCAGGTTCGC GACGCCGGAG
GAGGTCGCCG ATGCGGTCGC CTACCTGGTC TCCCCGTCTG CGGGGTTCAC CACGGGCGCC
CGGCTGGGTG TGGACGGTGG TCGCAACGCC TGA
 
Protein sequence
MSGVLDGRRA LVTGGGRGIG AAIALRLARD GAAVAISYHS DAESAAATAA AIAERTGGKA 
VIVQADTGDA RDAERVVDEA AELLGGLDIL VNNAGILDPS SAVIDDLDPA VAGRVLDVNV
RGPLLASRAA ARHLGEGGRI VNLGSCVGER VPGAGYTVYA TSKAAITGMT KALARDLGPR
GITVNEVAPG ATDTDMNPQD GPNSAPQKEA SPLGRFATPE EVADAVAYLV SPSAGFTTGA
RLGVDGGRNA