Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1167 |
Symbol | |
ID | 9245017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1423386 |
End bp | 1424075 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003679114 |
Protein GI | 297560140 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.227464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTC TGGAACTGGA CGGTGTGTAC GCCGGATACG GGCGCGAGGA CGTCCTGCGG GGCGTCGACG CGGCGGTCCC GGAGGGCGCG GTCACGGCGC TCGTGGGGCC CAACGGGTCG GGCAAGTCCA CGCTGCTCGG CCTCATGGCG GGCACGGTCA GGGTCCGCCG GGGCGGGGTC CGGGCCTCGC GTCCGGCCCG CCCCGCCTTC GTGGTCCAGC GCAGCGCGGT CCCCGACGCC CTGCCGGTCA CCGTGCGCGA GGCCGTCGCG ATGGGGAGGT GGGCCCACCG GGGGTTCTGG CGGCCGCTGA CCCGGCGCGA CCGCGCCGTG GTCGCGGAGT GCCTGGACCG ACTGGACGTC GCCGACCTGG CCGAACGCCG CCTCGGGGAG CTGTCGGGCG GTCAGCGCCA GCGGGTGCTC ATCGCCCAGG GCCTGGCGCA GGAGGCGGAC CTGCTCCTGC TGGACGAGCC CTCGGCCGGG CTGGACCACC GTGCGCGCGA GTACGTGCGC CGCGTCCTGG AGCGGGCCCG CGCCGACGGG GTCACCGTCG TGCACGCCAC CCACGCCCCC GACGAGGCCT TCGACGCCGA CCACTGCCTG GTGCTCGCGG GCGGGCGGAT CGCGGCCTCG GGACCGCCGG AGGAGGCCGC TCGGGCCTGG GAGGGCGCGC GGGGAGCCGG GTTCCGTTAG
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Protein sequence | MNRLELDGVY AGYGREDVLR GVDAAVPEGA VTALVGPNGS GKSTLLGLMA GTVRVRRGGV RASRPARPAF VVQRSAVPDA LPVTVREAVA MGRWAHRGFW RPLTRRDRAV VAECLDRLDV ADLAERRLGE LSGGQRQRVL IAQGLAQEAD LLLLDEPSAG LDHRAREYVR RVLERARADG VTVVHATHAP DEAFDADHCL VLAGGRIAAS GPPEEAARAW EGARGAGFR
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