Gene Ndas_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1167 
Symbol 
ID9245017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1423386 
End bp1424075 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content78% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003679114 
Protein GI297560140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.227464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC TGGAACTGGA CGGTGTGTAC GCCGGATACG GGCGCGAGGA CGTCCTGCGG 
GGCGTCGACG CGGCGGTCCC GGAGGGCGCG GTCACGGCGC TCGTGGGGCC CAACGGGTCG
GGCAAGTCCA CGCTGCTCGG CCTCATGGCG GGCACGGTCA GGGTCCGCCG GGGCGGGGTC
CGGGCCTCGC GTCCGGCCCG CCCCGCCTTC GTGGTCCAGC GCAGCGCGGT CCCCGACGCC
CTGCCGGTCA CCGTGCGCGA GGCCGTCGCG ATGGGGAGGT GGGCCCACCG GGGGTTCTGG
CGGCCGCTGA CCCGGCGCGA CCGCGCCGTG GTCGCGGAGT GCCTGGACCG ACTGGACGTC
GCCGACCTGG CCGAACGCCG CCTCGGGGAG CTGTCGGGCG GTCAGCGCCA GCGGGTGCTC
ATCGCCCAGG GCCTGGCGCA GGAGGCGGAC CTGCTCCTGC TGGACGAGCC CTCGGCCGGG
CTGGACCACC GTGCGCGCGA GTACGTGCGC CGCGTCCTGG AGCGGGCCCG CGCCGACGGG
GTCACCGTCG TGCACGCCAC CCACGCCCCC GACGAGGCCT TCGACGCCGA CCACTGCCTG
GTGCTCGCGG GCGGGCGGAT CGCGGCCTCG GGACCGCCGG AGGAGGCCGC TCGGGCCTGG
GAGGGCGCGC GGGGAGCCGG GTTCCGTTAG
 
Protein sequence
MNRLELDGVY AGYGREDVLR GVDAAVPEGA VTALVGPNGS GKSTLLGLMA GTVRVRRGGV 
RASRPARPAF VVQRSAVPDA LPVTVREAVA MGRWAHRGFW RPLTRRDRAV VAECLDRLDV
ADLAERRLGE LSGGQRQRVL IAQGLAQEAD LLLLDEPSAG LDHRAREYVR RVLERARADG
VTVVHATHAP DEAFDADHCL VLAGGRIAAS GPPEEAARAW EGARGAGFR