Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1162 |
Symbol | |
ID | 9245012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1417574 |
End bp | 1418788 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003679109 |
Protein GI | 297560135 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.233578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.767056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATCA CCTCCGCCGA CGTCATCGTG ACGTGCCCGG GACGCAACTA CGTCACCCTC AAGATCACCA CCGAGGACGG GACCACCGGC CTCGGCGACG CCACCCTGAA CGGCCGCGAA CTCTCCGTCG CCTCCTACCT GCGCGACCAC GTCTGCCCGC TGCTCGTGGG CCGCGACTCC GGACGTATCA ACGACATCTG GCAGTACCTG TACCGCGGCG CCTACTGGCG GCGCGGCCCC GTCACCATGA CCGCGATCGC CGCCGTGGAC TGCGCCCTGT GGGACATCCT CGGCAAGCGG GTCGGCAAGC CCGTCCACCA GTTGCTCGGC GGAGCCGCGC GCGACGGCGT CATGGTCTAC GGCCACGCCA GCGGCCAGTC CGTGGACGAC CTCCTGGACT CGGTCGGCGG CTTCCTGGAC CAGGGGTACC GGGCGGTGCG TGTGCAGGCC GCCGTCCCGG GCCTGGAGAG CACCTACGGG CTGCACCACC CCGGCACCGG CCACACCTAC GAGCCCGCCG ACGCGGCGAT GCCCACCGAC AACGTCTGGC ACACCCCCGC CTACCTGGAC TTCGCGCCCG AGATGATGAA GGCGGTCCGG GAGAGGTTCG GCTACGGCTT CCACCTGCTG CACGACGTGC ACCACCGGCT CTCCCCGTTG GAGGCCGCCC AGCTGGGCAG GTCGCTGGAG CCCTACCGCA TGTTCTGGAT CGAGGACCCC ACCCCGGCCG AGGACCAGGA GGCGTTCCGC ACGATCCGCC AGCACACCAC CACCCCGCTG GCGGTGGGGG AGGTCTTCAA CACGATCTGG GACTGCCAGC ACCTGATCAC CGAGCGGCTC ATCGACTACA TCCGCATGTC GGTCTCGCAC AGCGGGGGCA TCACGCACCT GCGGCGGATC TTCGACCTGG CCGACCTGTA CGGGGTGCGC ACCGGCTCGC ACGGCGCGGG CGACCTGTCG CCGGTGTCGT TCGCCGCGGC CCTGCACCTG GACCTGACCG TGCCCAACTT CGGCATCCAG GAGTACATGG GGCACCTGGA GCCCGCCAGC GAGGTGTTCC GGACCTCCTA CACCTTCGCG GACGGCTACA TGCACCCGGG CGACGCGCCG GGTCTGGGGG TGGAGATCGA CGAGGAGGCC GCGGCCCGCT ACCCCTACGA GGCCCGGTAC CTGCCGGTCA ACCGCAGGCT CGACGGCTCG ATGCACGACT GGTGA
|
Protein sequence | MRITSADVIV TCPGRNYVTL KITTEDGTTG LGDATLNGRE LSVASYLRDH VCPLLVGRDS GRINDIWQYL YRGAYWRRGP VTMTAIAAVD CALWDILGKR VGKPVHQLLG GAARDGVMVY GHASGQSVDD LLDSVGGFLD QGYRAVRVQA AVPGLESTYG LHHPGTGHTY EPADAAMPTD NVWHTPAYLD FAPEMMKAVR ERFGYGFHLL HDVHHRLSPL EAAQLGRSLE PYRMFWIEDP TPAEDQEAFR TIRQHTTTPL AVGEVFNTIW DCQHLITERL IDYIRMSVSH SGGITHLRRI FDLADLYGVR TGSHGAGDLS PVSFAAALHL DLTVPNFGIQ EYMGHLEPAS EVFRTSYTFA DGYMHPGDAP GLGVEIDEEA AARYPYEARY LPVNRRLDGS MHDW
|
| |