| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1153 |
|---|
| Symbol | |
|---|
| ID | 9245003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1409466 |
|---|
| End bp | 1410053 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1130 |
|---|
| Protein accession | YP_003679100 |
|---|
| Protein GI | 297560126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.908122 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCGC CGTTCCTCAC CGTCGGCCAC TCCGACCGCA CGTTCGAGGA GTTCGCCGCG
CTGTTGCACG AGAACGGCGT GCACGTGGTG GTCGACGTGC GCAGGCTCCC GGGGTCGCGC
CGCAACCCGC AGTTCGACGG GGACGTCCTC TCCGAGTCCC TGCTCGGCGT CGGCATACGT
TACTCGCGCG TCGCGGAACT CGGCGGTCGG CGCCCGGTCG CCAGGGACGT GGCCCCCGAG
GTCAACGGGT TCTGGCGCAA CCGCAGTTTC CACAACTACG CCGACCACGG GCTCTCCGAC
GAGTTCGGCT CGGGGCTCGC CCGGCTGCGC GAGGCGGGCG AGGACCACCG CGCCGCCGTG
ATGTGCTCGG AGGCGGTGTG GTGGCGCTGC CACCGGCGCA TCATCGCCGA CCACCTGCTC
GCCCGCGGCC ACGAGGTCCT CCACGTCATG GCCGCCCACC GCGTGGACGC CGCCCGGCTC
ACTCCGGGGG CCGTCGTGCA CACCGACCGC ACCGTCACCT ACCCGGTGCG GCCCTCGGAC
GCGGACGGCG GCGGGGACGC CCGGGAGGAC GGGTCCCCCC GGGTGTGA
|
|---|
| Protein sequence | MAPPFLTVGH SDRTFEEFAA LLHENGVHVV VDVRRLPGSR RNPQFDGDVL SESLLGVGIR
YSRVAELGGR RPVARDVAPE VNGFWRNRSF HNYADHGLSD EFGSGLARLR EAGEDHRAAV
MCSEAVWWRC HRRIIADHLL ARGHEVLHVM AAHRVDAARL TPGAVVHTDR TVTYPVRPSD
ADGGGDARED GSPRV
|
|---|
| |