| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1143 |
|---|
| Symbol | |
|---|
| ID | 9244993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1397598 |
|---|
| End bp | 1398554 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003679090 |
|---|
| Protein GI | 297560116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.456891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CACAGCGAAG GATCGGCTCG GGCTTCGGCG GGCGCAGCAC CGCGCGCGAG
GTCCTGGACG GAATCGACCT GACCGGACGG CTGGCCGTCG TCACCGGCGG GTACTCGGGC
ATCGGGCTGG AGACCACCCG GGCCCTGGCG GAGGCGGGCG CCCGCGTCGT CGTGCCCGCG
CGGCGGCCCG AGGCGGCGGC CGAGGCCCTG GCCGGGGTCG AGGGCGTGGA GGTCGACGGC
CTGGAGCTGT CCGACCAGGG CGACGTGCGC GCCTTCGCCG AACGCTTCCT CAGGACGGGG
CGCGCGATCG ACGTCCTCGT CAACAACGCC GGGGTGATGG CCTGCCCCCA GGCCGTCGCC
GGACCCGGCT GGGAGTACCA GTTCGCCACC AACCACCTGG GGCACTTCAC CCTGGTCAAC
CGGCTCTGGC CGGCCCTGGC CGAGGGCGGG GCGCGGGTGG TCTCGGTGTC CTCCGGCGCG
CACCAGGCCT CACCGATCCG CTGGGAGGAC CCGTGGTTCG CCCAGGGCTA CGACCGGTGG
CTGGCCTACG GGCAGTCCAA GACCGCCAAC GCCCTGTTCG CCCTCCACCT GGACCGGCTG
GGAGAACCCC TCGGGGTGCG GGCCTTCTCC CTGCACCCGG GCGCGATCCT CACCCCCTTG
CAGCGGCACA TGACGCGGCG GGAGATGGTC GACGCGGGGT GGGTCGACGG GAACGGTGAG
CTGATCGACC CCCGGTTCAA GACGCCGGAG CAGGGCGCGG CCACCCAGGT GTGGGCGGCC
ACCTCGCCGC GGCTGGCCGG GATGGGCGGG GTGTACTGCG AGGACTGCGA CGTGGCCGTG
CCCGCCGGAA CCGAGCCCGG CGTGGAGGGC GTGCGCGACC ACGCGGCCGA TCCCGCGCAG
GCCGAGCGCC TGTGGGCGTT CTCCGCCGAG CTGACCGGGG AGGACGCCCT CGCCTGA
|
|---|
| Protein sequence | MTTPQRRIGS GFGGRSTARE VLDGIDLTGR LAVVTGGYSG IGLETTRALA EAGARVVVPA
RRPEAAAEAL AGVEGVEVDG LELSDQGDVR AFAERFLRTG RAIDVLVNNA GVMACPQAVA
GPGWEYQFAT NHLGHFTLVN RLWPALAEGG ARVVSVSSGA HQASPIRWED PWFAQGYDRW
LAYGQSKTAN ALFALHLDRL GEPLGVRAFS LHPGAILTPL QRHMTRREMV DAGWVDGNGE
LIDPRFKTPE QGAATQVWAA TSPRLAGMGG VYCEDCDVAV PAGTEPGVEG VRDHAADPAQ
AERLWAFSAE LTGEDALA
|
|---|
| |