Gene Ndas_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1110 
Symbol 
ID9244957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1361324 
End bp1362265 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content77% 
IMG OID 
ProductUspA domain protein 
Protein accessionYP_003679057 
Protein GI297560083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.237274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.260394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGGGA AGGGCGTGGA CACCGTCGGG GAAACGGGCG GTCCGGTCGT CGTCGGTGTC 
GGCCACACCT CCAGGGATTG GACGGTGGTG GGCTGGGCCG CCGCGGAGGC CGCCGACCGG 
GGGGCGGAGC TGGTCGTCGT GCGCGCGGAG GGCGCGGAGC ACCCCGGAGA GCCGTTCGTC 
CGCCTCCGGA CGTCGCTCTT CGGCCACGGG GACGGCGGGG CGGGGCACGC TCCGGCGGAG 
GAAGCCGCCC TGGCGGCCCG GGACCACCCC GGACTCGCGG TCCGCACCGA GTCGGTGCGA 
GCCGATCCGT CCGCCGCGCT GGTCGCCGCG TCGCGTCGGG CCGCCCTGGT CGTCGTGGGC 
TCCCGGGGGC CGGACGCCCT GAGGTTCCCA CCGGATGCGG TGGGACCCCG TGTGTGCGCC 
TATGCCGCGT GCCCCGTGGC GGTGGTGCCG CCGCAGGCGT CCTTGGAGCG GTGCGGCCAC 
GTGGTGGCGG GTGTGGACGG TTCCCCCGAC TCGGACGCCG CCCTGCGGTT CGCGCTGGAG 
GAGGCCGCCC GGCGCGGCGC GCGCCTGACG GTCCTGCACG TCCGCCCCTC GGCGGAGGCG 
GTGGGCCGGC TGACGCTGGA CCTGGTCGGA CCGGAGGCCG TGATGCTGCA CGCCGAGAGG 
CGGATGCACC GCATGGTGGA CGAGGCCCGC GACGAGCGGA CCGGGGACGT CGCGGTCCGG 
ATCCTGGTCC TCGTACGCCA CGACCACCCG GCTCACGCCC TCGTCGAGGC CGCGGGCACC 
GCCGACGTGG TCGTCGTCGG TGCCCGCGGC ACGGGGGGCT TCCGGGGGCT GCTGCTGGGC 
TCGGTCAGCC AGAAGGTGCT GCACCGCAGC CCCGTCCCGG TGGTCGTGGC GCGCGTGCAC 
ACCGGTCGGA GCGCTAGGTC GGCCCGGTCA CCACAGGGGT AG
 
Protein sequence
MVGKGVDTVG ETGGPVVVGV GHTSRDWTVV GWAAAEAADR GAELVVVRAE GAEHPGEPFV 
RLRTSLFGHG DGGAGHAPAE EAALAARDHP GLAVRTESVR ADPSAALVAA SRRAALVVVG 
SRGPDALRFP PDAVGPRVCA YAACPVAVVP PQASLERCGH VVAGVDGSPD SDAALRFALE 
EAARRGARLT VLHVRPSAEA VGRLTLDLVG PEAVMLHAER RMHRMVDEAR DERTGDVAVR 
ILVLVRHDHP AHALVEAAGT ADVVVVGARG TGGFRGLLLG SVSQKVLHRS PVPVVVARVH 
TGRSARSARS PQG