| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1095 |
|---|
| Symbol | |
|---|
| ID | 9244941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 1344606 |
|---|
| End bp | 1346162 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003679043 |
|---|
| Protein GI | 297560069 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.997125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTTG GTGGCTACCT CACCCGAAGC GCGTCCTACT GGCCGGAGGC GCAGGCCCTG
GTGTCCGGGG ACCGGCGCTG GAGCTACCGT GATCTCGAAC AGGAGGCCAA CCGGCTCGCC
TCCGCCCTGC TCGCGCGCGG TTACGGCCTC GGCATCGCCG TCGCCACCCT CGCGGGCAAC
CGTGGCGAAC TGGTCGTCGC CGAGATGGCC GTCTGCAAGG CGGGGTGCCT GCGCGTGCCG
ATCAGCGCCC GACTGGCGGC GGCCGAGGTC GAACACGTCC TCCTGGACGC GCGGGTGCGG
CTGATCCTCG TCGACGGGGC CAACCTCGGC GCGGTGCGCG AGATCGTCGA CGGGCGCGCG
CTCGACTGCC TCGTCGTCGC CTTCGACGAC GGGGCCGACG CGCCCCTGAC CTACACCGCC
CTCCTCGCCG AGGGCGACCC CGCCCCGGTG GCCGTGGACC TCGACCCCCA CGCTCCGGCG
GTGCTGAACT TCACCTCCGG TTCCACCGGC ACCCTCAAGG CGGCCGTCCA GACGGTCGAG
AACCGCCTGT CCAACATGCG CAAGCTGGCG ATGAACCCCC AGGGCTCGGT CGGGCCGGAC
TCGGTCTACC TCGCACCCGG CCCCATCACC CACGCCAGCG GCATGGGCAT CCTCGGCTGC
TTCTTCCGCG GCGCCACGGT CGTGGTGCTC CCGTCCTTCG ACGCCGAGGC CTACCTCGAC
GCCCTCGAAC GCGAGGGCGT CACCCACACC TTCCTGGTGC CGGTGATGCT CAACCTGGTG
CTGGCCTCAC CGACCGCGGG GCGCCGGGAC CTGTCCCGGC TGCGCAGCGT CACGGTCGGC
GGCGCGCCGG TGAGCCCCGC GCGCCTGCGC GGTGCCGTCG AGCTGTTCGG ACCCGTGGTC
AACCAGGGCT ACGGGCAGGG GGAGACCACG AGCGCCATCA CCTTCCTCAC CTCGGAGGAC
GTGGTGCGGG GGATCGAGTC CGACCCCGAG CTGCTGCTCT CCTGCGGGCG CCCGGTCTTC
GACACGGAGG TCCGTGTGGT CGACGACGGG GGAGAACCGC TGCCCGCGGG CGAGGTGGGC
CAGATCGTGG CGCGGGGGCC CGACTGCGTG CGGGAGTACT TCCACGCCGC GGAGGCCACG
GCCGAGACCT TCCGCGACGG CTGGGTGTAC ACCGGCGACC TCGGCTTCCA GCGTCCGGAC
GGCTACCTGT TCATCGTGGA CCGCCAGAAG GACATGATCA TCTCCGGCGG CTACAACGTC
TACTGCACCG AGGTGGAGGC CGCCCTCTAC GAACACCCCG CCGTCTTCGA GGTGTGCGTG
GTGGGCGCCC CGGACGAACG GTGGGGGGAG ACCGTCAAGG CGTTCGTGGC GCTCCGACCC
GGCGCCGGGG CCAGCGGGGA GGAACTGCGC GAGTTCTGCG CGACCCGGCT GTCCCGGGTC
AAGCTCCCGC GCGTCGTCGA GTTCGTCCAG CAGCTCCCGC GCAACCGCAA CGGCAAGATC
GACCGCCGCG CCCTTCGCCA GCGCGAGTGG GCGGGCACCG AACGAAAGGT GGGGTGA
|
|---|
| Protein sequence | MNLGGYLTRS ASYWPEAQAL VSGDRRWSYR DLEQEANRLA SALLARGYGL GIAVATLAGN
RGELVVAEMA VCKAGCLRVP ISARLAAAEV EHVLLDARVR LILVDGANLG AVREIVDGRA
LDCLVVAFDD GADAPLTYTA LLAEGDPAPV AVDLDPHAPA VLNFTSGSTG TLKAAVQTVE
NRLSNMRKLA MNPQGSVGPD SVYLAPGPIT HASGMGILGC FFRGATVVVL PSFDAEAYLD
ALEREGVTHT FLVPVMLNLV LASPTAGRRD LSRLRSVTVG GAPVSPARLR GAVELFGPVV
NQGYGQGETT SAITFLTSED VVRGIESDPE LLLSCGRPVF DTEVRVVDDG GEPLPAGEVG
QIVARGPDCV REYFHAAEAT AETFRDGWVY TGDLGFQRPD GYLFIVDRQK DMIISGGYNV
YCTEVEAALY EHPAVFEVCV VGAPDERWGE TVKAFVALRP GAGASGEELR EFCATRLSRV
KLPRVVEFVQ QLPRNRNGKI DRRALRQREW AGTERKVG
|
|---|
| |