Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1067 |
Symbol | |
ID | 9244913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1313847 |
End bp | 1314485 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679015 |
Protein GI | 297560041 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.530116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA GCAACCGGAC ACAGATCCTG GACGCGGCCT TCCGCGTCGT CCAGCGCGAC GGCGTCAGGG CCCTGACCTA CGAGTCGGTG GCGGCCGAGA CGGGTCTGAC CAAGGGAGGG CTGCTCTACC ACTTCCCCTC GCGCGAGTCC CTGCTCCAGG CCCTGCACGA ACACCTGGCC CAGGGCTGGG ACGACCACCT GGCGGAGGCC GCGGGGAGGA GCGCGGACCG GGCCACGCCC CGCGAGCGCC TGGCGGCCTA CGCCCGCGTG GCCGCGCACA GCTCCACGCG CGCCGAGCTG CTGCTCCTGC TGGAGACCGC GAACGAACCG GCCACGCGCG CCCCCTGGGA CGAGGTGATG GGGCGCTGGA CGTCCGAACC GTCCGCCGGG CCGCTGACGC CGGAGGAGAT GGAGCTGTTC GTGCTGCGCC TGGCGGCGGA CGGCCTGTGG CTGTACGAGT CGCTGTCCAG CGGCACGCTC CCGCCCCCGC TGCGCCGGCA GGTCGCCGAG CACCTGGCCA GCGCCATCGC GCCCGGACAG GACCGGGACG CGGAGCCGGA CCGGGAAGCA CCGGTTCCCG GTCCGGACGC TTCGCACGCC CCGGACGCGG AACCGGAACC GGGTGCCGGG GCCCGCTGA
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Protein sequence | MRKSNRTQIL DAAFRVVQRD GVRALTYESV AAETGLTKGG LLYHFPSRES LLQALHEHLA QGWDDHLAEA AGRSADRATP RERLAAYARV AAHSSTRAEL LLLLETANEP ATRAPWDEVM GRWTSEPSAG PLTPEEMELF VLRLAADGLW LYESLSSGTL PPPLRRQVAE HLASAIAPGQ DRDAEPDREA PVPGPDASHA PDAEPEPGAG AR
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