Gene Ndas_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1027 
Symbol 
ID9244873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1255166 
End bp1255804 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID 
ProductIsochorismatase 
Protein accessionYP_003678976 
Protein GI297560002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.553092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.000215707 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCCTTC CCGCGATCGA GCCCTACCCC ATGCCTGGCG AGGGCGACCT GCCCGACAAC 
CGGATGTCGT GGTCGGTGGA CCCCGACCGC TGCGTCCTGC TCATCCACGA CATGCAGCGC 
TACTTCCTCG ACGCCTTCTC CCCCGACGAG GAGCCGGTGC CGAGCCTGAT CGCCAACGTC 
GGCGCCCTGC GGAGCGCGTG CGCCGCACTC GGCGTTCCGC GCGTCTACAC CGCCCAGCCC 
GGCTCCCAGG ACCCGGACGA CCGGGGGCTG CTCACCGACC TGTGGGGCGA GGGGCTGCGT 
GACGACCCGG CCCACACCGC GATCGTGGAG GGGCTGGAAC CCGCCGACGA CGAGATCGTC 
ATGACCAAGT GGCGCTACAG CGCCTTCGCC AGGAGCGGTC TGGAGGAGTA CCTGCGCGAC 
GCGGGCCGCG ACCAGCTGGT CGTCTGCGGC GTCTACGCCC ACATCGGCGT CCTGACGACC 
GCGTGCGACG CCTTCATGCG CGACGTCCAG GCCTTCGTCG TGGCCGACGC GGTGGCGGAC 
TTCTCCGCGG GCGACCACGC GATGGCCCTG TCCTACGCCG CCCGCCGCTG TGCCGGGACG 
GTGAGCACCA AGGGGGTTCT GGCCGCACTG AACGGCTGA
 
Protein sequence
MSLPAIEPYP MPGEGDLPDN RMSWSVDPDR CVLLIHDMQR YFLDAFSPDE EPVPSLIANV 
GALRSACAAL GVPRVYTAQP GSQDPDDRGL LTDLWGEGLR DDPAHTAIVE GLEPADDEIV 
MTKWRYSAFA RSGLEEYLRD AGRDQLVVCG VYAHIGVLTT ACDAFMRDVQ AFVVADAVAD 
FSAGDHAMAL SYAARRCAGT VSTKGVLAAL NG