Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1025 |
Symbol | |
ID | 9244871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1252856 |
End bp | 1253650 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003678974 |
Protein GI | 297560000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.55836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00258136 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCACGA CCCGTTCTGC ACAAGACCCC GGTGTGGCCC TGGTGACCGG GGCCGCCGGG GGCATCGGCT CCGCCGTCGT CCGGGGGATG GCCGAACAGG GCTTCCGCGT CGCGGCCCTG GACGTGGCCG GGGAGGGAGC CCGCGCTCTG GCCGCGGAAC TCACCGGCCG GGGCCACCGC GTCCGCGACT ACGCGGTGGA CGTCACCGAC GAGGACTCCG TCGAGCGGGC CGTGGCCTCG GTCGAGGAGG AGTTGGGCGC CGTCACCGCC GCGGTCAACG TCGCCGGTGT GCTGCGCTGG GGCGCGGTCA CCGGCTTCCC CTCCCGGGTG TGGCGGGAGG TCTTCGACGT CAACGCCCTC GGCGTCTTCC ACGTCTCCCG CGCCGCGGCC CGCGTGATGG TCCCGCGCGG TGCCGGGAAC ATCGTCACCG TCAGCTCCGA CGCGGCCGCG GTGCCCAGGG CCGCCATGGC CGCCTACGCC GCGTCCAAGG CCGCCGCGAC CCACTTCACG CTGTGCCTGG GCCTGGAGCT GGGGCCCCAC GGGATCCGCT GCAACGTCGT CTCCCCGGGA TCGACCGACA CCCCGATGCG GCGCCAGCTG TGGGAGGACG GGCCCTCCTC CCCGGAGGCG GAGCCCGGCA ACGACCCCTC GGCGTTCCGC CCGGGCGTCC CGCTGGGCCG GGTGGCGCTG CCCGGGGACG TCGCGGAGGC CGTCGCCTTC CTGGCCTCGC CGCGCGCCCG GCACGTCACC CTGCACGACC TGCGCGTGGA CGGAGGGGCG AGCCTTGGCG CCTGA
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Protein sequence | MSTTRSAQDP GVALVTGAAG GIGSAVVRGM AEQGFRVAAL DVAGEGARAL AAELTGRGHR VRDYAVDVTD EDSVERAVAS VEEELGAVTA AVNVAGVLRW GAVTGFPSRV WREVFDVNAL GVFHVSRAAA RVMVPRGAGN IVTVSSDAAA VPRAAMAAYA ASKAAATHFT LCLGLELGPH GIRCNVVSPG STDTPMRRQL WEDGPSSPEA EPGNDPSAFR PGVPLGRVAL PGDVAEAVAF LASPRARHVT LHDLRVDGGA SLGA
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