Gene Ndas_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1025 
Symbol 
ID9244871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1252856 
End bp1253650 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content76% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003678974 
Protein GI297560000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.55836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00258136 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCACGA CCCGTTCTGC ACAAGACCCC GGTGTGGCCC TGGTGACCGG GGCCGCCGGG 
GGCATCGGCT CCGCCGTCGT CCGGGGGATG GCCGAACAGG GCTTCCGCGT CGCGGCCCTG
GACGTGGCCG GGGAGGGAGC CCGCGCTCTG GCCGCGGAAC TCACCGGCCG GGGCCACCGC
GTCCGCGACT ACGCGGTGGA CGTCACCGAC GAGGACTCCG TCGAGCGGGC CGTGGCCTCG
GTCGAGGAGG AGTTGGGCGC CGTCACCGCC GCGGTCAACG TCGCCGGTGT GCTGCGCTGG
GGCGCGGTCA CCGGCTTCCC CTCCCGGGTG TGGCGGGAGG TCTTCGACGT CAACGCCCTC
GGCGTCTTCC ACGTCTCCCG CGCCGCGGCC CGCGTGATGG TCCCGCGCGG TGCCGGGAAC
ATCGTCACCG TCAGCTCCGA CGCGGCCGCG GTGCCCAGGG CCGCCATGGC CGCCTACGCC
GCGTCCAAGG CCGCCGCGAC CCACTTCACG CTGTGCCTGG GCCTGGAGCT GGGGCCCCAC
GGGATCCGCT GCAACGTCGT CTCCCCGGGA TCGACCGACA CCCCGATGCG GCGCCAGCTG
TGGGAGGACG GGCCCTCCTC CCCGGAGGCG GAGCCCGGCA ACGACCCCTC GGCGTTCCGC
CCGGGCGTCC CGCTGGGCCG GGTGGCGCTG CCCGGGGACG TCGCGGAGGC CGTCGCCTTC
CTGGCCTCGC CGCGCGCCCG GCACGTCACC CTGCACGACC TGCGCGTGGA CGGAGGGGCG
AGCCTTGGCG CCTGA
 
Protein sequence
MSTTRSAQDP GVALVTGAAG GIGSAVVRGM AEQGFRVAAL DVAGEGARAL AAELTGRGHR 
VRDYAVDVTD EDSVERAVAS VEEELGAVTA AVNVAGVLRW GAVTGFPSRV WREVFDVNAL
GVFHVSRAAA RVMVPRGAGN IVTVSSDAAA VPRAAMAAYA ASKAAATHFT LCLGLELGPH
GIRCNVVSPG STDTPMRRQL WEDGPSSPEA EPGNDPSAFR PGVPLGRVAL PGDVAEAVAF
LASPRARHVT LHDLRVDGGA SLGA