Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1011 |
Symbol | |
ID | 9244857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1235995 |
End bp | 1237152 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003678960 |
Protein GI | 297559986 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00895095 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.937142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGAGTC CCAGACCACC GATTCGCGTA GCCGTCGTCG GAAGCGGCGG TATCGCCCGG GGCAGGCACC TGCCCGCGCT CGCCGCCCTG GGGGACAGGG TCGAGGTGGT CGCGCTGGCC GACCCCGACG CCTCCCGCGT GGCCGCGACC GCCGACGAGT GGGGCGTTCC CGGACGCCAC ACCGGCCTCG ACGCCCTGCT GCGCGCCGAG TCCCCCGACC TGGTGATCGT GTGCACGCCG CCCGTCGCGC ACAAGGACGC GGTGATCACG GCCCTGGACG CCGGGTGCTG GGTGTGGTGC GAGAAGCCGC CGGCGCTGTC CCTGGCAGAG TACGACGAGG TCAGCACCCA CGAGGGAGGC GAATCCGGTC CCGGCGGCGG AGGCGGTCCC TTCGTCAGCT ACGTGTTCCA GCACCGGTTC GGCTCCGGCG CCGAGCGCCT GCGCCGCCAC CTGGCCGAGG GCACGCTCGG CCGTCCGCTC GTCGGCGTGT GCAACACCCT GTGGTTCCGC GCCCCGGACT ACTTCGAGGT CCCCTGGCGC GGACGCTGGG CGACCGAGGG CGGCGGCCCG AGCATGGGCC ACGGCATCCA CCAGATGGAC CTCATGCTCT CCCTGCTCGG CGACTGGTCC GAGGTCACGG CCGTGATGTC CACGACCGCC CGGTCCACCG AGACCGAGGA CGTGTCGATG GCGATCGTGC GCCTGGAGTC GGGCGCGACC GTCTCCGTGG CCAACAGCCT GCTCTCCCCC CGCGAGACCA GTTACCTGCG CTTCGACTTC GAGCACGCCA CGGTCGAGCT GGAGCACCTC TACGGCTACG ACAACGCGCA CTGGCGCTGG ACCCCCGCGC CGCACGTGCG CGACGCCGAC GCGGTCGCGT CCTGGCCGCC GGTGGAGGAC GAGCCGAGTT CGCACCGGGC CCAGCTCGCC GCGCTGCTCG ACGCGATGGA ACGCGGGGAG CGGCCCCGCG CCAGCGGCCC CGACGGGCGG CGCGCCCTCG AACTCGTCAC GGGCATGTAC CGGTCGGCCC TGACCGGCAC GACGGTGCGG CGCCGGGACC TGACCCCCGA CGACGGCTTC TACCACGCGA TGCACGGGGG CGACGCGGAC ACCGCCGCGG CCGTCCTCAC CAGGACGGAG GAGACCACAG GTGTCTGA
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Protein sequence | MPSPRPPIRV AVVGSGGIAR GRHLPALAAL GDRVEVVALA DPDASRVAAT ADEWGVPGRH TGLDALLRAE SPDLVIVCTP PVAHKDAVIT ALDAGCWVWC EKPPALSLAE YDEVSTHEGG ESGPGGGGGP FVSYVFQHRF GSGAERLRRH LAEGTLGRPL VGVCNTLWFR APDYFEVPWR GRWATEGGGP SMGHGIHQMD LMLSLLGDWS EVTAVMSTTA RSTETEDVSM AIVRLESGAT VSVANSLLSP RETSYLRFDF EHATVELEHL YGYDNAHWRW TPAPHVRDAD AVASWPPVED EPSSHRAQLA ALLDAMERGE RPRASGPDGR RALELVTGMY RSALTGTTVR RRDLTPDDGF YHAMHGGDAD TAAAVLTRTE ETTGV
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