| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0994 |
|---|
| Symbol | |
|---|
| ID | 9244840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1215262 |
|---|
| End bp | 1216233 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003678944 |
|---|
| Protein GI | 297559970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCAG CCGTCCCACG GGAGCCCGGC CCCCTGGAGG AGGCCGCACA GGCCTTCACC
GGTGTGCGCC CGCGCCTGTT CGGTATCGCC TACCGGATGC TCGGCAGCTG GGCCGAGGCC
GAGGACCTGG TCCAGGAGGT CTGGCTGCGG TGGCAGAGGA CGGACCACGG CGTCGTGGAG
GACCCCGCCG CGTTCCTGGC CACGATCACC ACGCGCCTGG CCATCAACGT CCTGAAATCG
GCCCGGGCCC GCCGTGAGGC CTACGTGGGA CCGTGGCTGC CCGAGCCCGT GGACACCGGC
GCCGACCCCG GGGTCGGCGC GGAGCGCGGC GCGGCGGTCG AACTCGCCCT CCTCCTGCTC
ATGGAGAAAC TCACCCCCAC CGAGCGCGCC GCCTACGTCC TGCGCGAGGC CTTCGACTAC
CCCTACGACC GGATCGCCGC CGTGGTGCGG ACCGGCGAGG CCAACGCCCG CAAGCTGGTC
AGCCGCGCGC GCGGGCACCT GTCCGAGGGC CGGAGGGAGC CGGTGAACCC TCGGGAGCAC
CGGAGACTGG TGGAGGCCTT CCTCACCGCC GCCCAGGCGG GCGACCTGGC CGCCCTGGAG
GAGATCCTCG CCGAGGACGT GGTCAGCCGG TCCGACGGCG GGGGCCGGGT GCGCAACAGC
GCCCGCGTTC CCGTCACCGG CAGGGACCGC GTGGCCAGAC TCCTCCAGGC CTTCGCCCCG
CGCTTCTGGC CGGGCTCGCG CACGGAGATC GCGGAGATGA ACACCAGACC CGGCCTCGTG
GTGTCCCGGG GCGGGACGCC CTTCGCGCTG CTGTCCGTCG ACGCCTCGGC GCAAGGCATC
CACCAGCTCC TGTGGGTGAT GAACCCGGGC AAGATCGCCT CCTTCCAGCG CTCCTCGCGG
GGCGTCATCG GCGCCCCCGG GAGCCCGCCG GGAGCCGGGG GCCTGTCGGA CGCCGGGGAA
CCGGCCTGCT GA
|
|---|
| Protein sequence | MQSAVPREPG PLEEAAQAFT GVRPRLFGIA YRMLGSWAEA EDLVQEVWLR WQRTDHGVVE
DPAAFLATIT TRLAINVLKS ARARREAYVG PWLPEPVDTG ADPGVGAERG AAVELALLLL
MEKLTPTERA AYVLREAFDY PYDRIAAVVR TGEANARKLV SRARGHLSEG RREPVNPREH
RRLVEAFLTA AQAGDLAALE EILAEDVVSR SDGGGRVRNS ARVPVTGRDR VARLLQAFAP
RFWPGSRTEI AEMNTRPGLV VSRGGTPFAL LSVDASAQGI HQLLWVMNPG KIASFQRSSR
GVIGAPGSPP GAGGLSDAGE PAC
|
|---|
| |